Sus scrofa (pig): 100153403
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Entry
100153403 CDS
T01009
Symbol
EEA1
Name
(RefSeq) LOW QUALITY PROTEIN: early endosome antigen 1
KO
K12478
early endosome antigen 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04144
Endocytosis
ssc04145
Phagosome
ssc05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100153403 (EEA1)
04145 Phagosome
100153403 (EEA1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100153403 (EEA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100153403 (EEA1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100153403 (EEA1)
Protein recycling
Other Rab GTPase associated proteins
100153403 (EEA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ATG14
ADIP
FYVE_CARP1-2
IBR
zf-C2H2_ZNF462_11
AP205_coat
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
100153403
NCBI-ProteinID:
XP_020946919
Ensembl:
ENSSSCG00000000912
LinkDB
All DBs
Position
5:90131707..90257014
Genome browser
AA seq
1415 aa
AA seq
DB search
MLRRILQRTPGRVGSQGSDLDSSAAPINTVDVNNESSSEGFICPQCMKSLGSADELFKHY
EAVHDAGNDSSQGGEALALKRDDITLLRQEVQDLQASLKEEKWYSEELKKELEKFQGLQQ
QELKPDGVVADSSAELQSLEQQLEEAQTENFNIKQMKDLFEQKAAQLATEIADIKSKYDE
EKSLREAAEQKVTHLTEELNKEATIIQDLKTELLQRPGIEDVAVLKKELVQVQTLMDNMT
LERERESEKLKDECKKLQAEYVNSEATISQLRSELAKGPQEVAVYVQELQKLKSSVNELT
QKNQNLTEKLQKKELDYTQLEEKHNEECVSKKNIQASLHQKDLDCQQLQSRLSASETSLQ
RIQAELGEKGEATQKLKEELSEVETKHQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHS
KLLETERQLGEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEELKEKVANSTELQH
QLDKTKQQHQEQQALQQSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQESKENISF
LEKEREDLYAKIQAGEGETAVLNQLQEKNHILQEQVTQLKAQENLHDQVQEQKALLRAAQ
DXVLSLEASINELNNQLNKRKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQ
NALQDKQQELNKVTTQLAQVTTHLQDKQEYGSQVKSHLKEYKEKHLSLEQKTEELEGQIR
KLEADSLEVKASKEQALQDLQQQRQLNTDLELRATELSKQVEVEKETISSTKLDLQKKSE
ALENIKQVLTKQEEKKKSLNKKIENLSQNAKMQQEELNNKIQAAVTELHKVKMEKETLVT
ELSGAKEELSKVSDSLKNSRSEFEKESQKGKAAILDMEKTCKDLKHHLEVQIECAHKEQN
ELKNSLEKEELSSHQLKLECNSMQGQLMQAQKSLKQKEKEEQRLQGNRNELKQLTEQKKK
QIEALQGEIKRLDFGMHAVLNNYCMFQTELENKLQQQSTQAAQELAAEKEKISVLQNAYE
KNQENLKQLQSDFYGKESELLATRQDLKSVKETLSLAXEGLISNRNQIGNQNKLIRELKT
ARTSLEQDSAKKEEQLKEQXKPLQDVQKEKDTGTREVTEKELVNEKSKLAEIEEIKCGQE
KXIAKLSEEPKSHKQESIKEVTNLKDARQLLIQQKLELQGKVDSLKATLEQEKKNQQMLK
EQMKKEEDELKREFMEKETKLHSEIKEKAAAVQKHEENEAKRTMQMTALNENLGTVKKEW
QSSQRRVSELEKQRDAELTGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLEL
QRKLDNTTAAVQELGRENQSLQIKHTQALNRKWAEDNEVQNCMACGKGFSVTVRRHHCRQ
CGNIFCAECSAKNALTPSSKKPVRVCDSCFNDLQG
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggaggattttgcagaggactcctgggagagttggctctcaaggttctgattta
gattcatcagcagctcctataaacacagtggatgtcaataatgaaagctcctcagagggt
ttcatatgtccccagtgtatgaaatctcttggatctgctgatgaacttttcaaacactat
gaggcagttcatgatgctggtaatgattcaagtcagggaggagaagcacttgctctgaaa
cgagatgacataacactactcagacaagaggtccaagacctacaggcttcacttaaggaa
gaaaaatggtactcagaagaattaaagaaagaattagaaaaatttcaaggactgcagcag
caagagttgaaacctgatggagtagtggctgattcatcagcagaactacagtctttggaa
cagcaattagaagaagcccaaacagaaaattttaatattaagcaaatgaaagacttattt
gaacagaaagcagcccaacttgccactgaaattgcagacataaagtcaaagtatgatgaa
gaaaagagtcttcgagaagctgctgaacaaaaagtgacacatctaacagaagaattaaac
aaagaagcaactataattcaagatctaaagactgaactgcttcagagacctggtatagaa
gatgttgctgtgctcaagaaagaactggtccaagtgcaaactctaatggacaacatgacc
ttggaacgtgagagagaatctgaaaaactcaaagatgagtgcaaaaagttacaagcagaa
tatgttaactcagaggccacgataagccagctgaggagtgaacttgccaaaggcccccag
gaagttgctgtatatgtgcaggaactacaaaaacttaaaagttcagttaatgaattaaca
caaaaaaatcagaacttgactgaaaagttgcagaagaaagaactagactatactcagtta
gaggagaaacataatgaagaatgtgtgagtaagaagaatatacaagcaagccttcaccaa
aaagacctagattgtcaacagcttcagtcaaggttatctgcatctgaaacttcactgcag
agaatacaggcagaattgggtgaaaagggagaagctactcaaaagctcaaagaagaatta
tcagaagtggagaccaagcaccagcatcttaaggcagagtttaaacagctacaacaacag
agagaagagaaggagcagcatgggttacaactccaaagtgaaattaatcagttacatagc
aaacttctggagacagagcgccaactaggggaagctcatggtaggctgaaagaacagaga
cagctttcaagtgaaaagttgatggataaagaacaacaagtggctgatctacaactcaaa
ctttctcgtttagaagaagaactgaaggaaaaagtagcaaattccacagaattgcagcat
cagttagataaaacaaagcaacagcatcaagaacaacaagctcttcagcaaagcactaca
gcaaaacttcgagaagctcagaatgatttggaacaagtacttcgtcaaattggtgataag
gaccaaaagatccagaaccttgaagccttattacaggagagtaaagaaaatatttctttc
ttagaaaaggaaagagaagatctttatgcaaaaattcaggctggtgaaggagagactgct
gttcttaatcaattgcaagaaaaaaaccatatattacaggaacaagtaactcaactaaag
gcccaggagaatttgcatgaccaggtgcaagagcagaaggcacttcttagagctgcacaa
gacnntgtcctctccctagaagccagcatcaatgaattaaataatcaattaaataaaaga
aaggagaaggtctcccagcttgacatacagattaaagccaaaactgaattattactatca
gcagaagcagcaaaaactgctcaaagagcagatcttcaaaatcatttggacacagctcaa
aatgcattacaagataaacagcaggagttgaataaagtcactactcaactggctcaggtc
actacacatttgcaggataagcaagaatatggcagtcaggtgaaaagtcatcttaaagaa
tataaagagaaacatctctctttagaacagaaaactgaagaattagaaggtcaaattagg
aaattggaagctgattcacttgaagttaaagcaagcaaggagcaagctttgcaggatcta
caacagcaaagacaactgaacacagatttagagcttagagctacagaattgagtaaacaa
gttgaagtggagaaagaaaccatatccagtacaaagttggatctacagaagaaatctgaa
gcacttgaaaatattaagcaagtgcttaccaagcaagaagaaaaaaaaaaatccttaaac
aagaaaatagaaaatttaagtcaaaatgcaaaaatgcagcaggaagaattgaataacaaa
attcaagcagcagtgacagaactacacaaagtgaagatggagaaagaaactctagtaaca
gagctttctggagcaaaagaggaattatcaaaagtttctgattctttgaagaactccaga
agtgaatttgaaaaggaaagtcagaagggaaaagctgctatattagatatggagaaaacc
tgcaaagatttaaagcatcaccttgaagtacagatagaatgcgcacataaggaacagaat
gaactgaaaaactcacttgaaaaagaggagctaagttctcatcagttgaaattggagtgc
aattcaatgcagggacaactaatgcaggcccagaagagtttaaaacaaaaggaaaaagaa
gaacaacgacttcagggtaacagaaatgagttaaagcaactgactgaacagaagaaaaag
caaattgaagcactccaaggagagattaaaagactggattttggtatgcatgctgtttta
aataactattgtatgtttcagacagaacttgagaataaactacagcagcagtcaacacaa
gcagcacaggaacttgcagcagagaaagagaaaatatcagtgttacaaaatgcctatgaa
aaaaatcaggaaaatctaaagcagcttcagtctgatttctatgggaaggaatctgaactt
cttgccacaaggcaagatctcaagtctgtgaaagagacgctttctctagcataggagggc
ttgatttcaaacaggaatcaaattggaaaccaaaataaactgattcgagaactgaagact
gccaggacttctttggagcaagattcagccaagaaagaagagcagttgaaggagcagtag
aaaccactacaagatgttcagaaagaaaaggacacaggaacaagagaagtcactgaaaaa
gaactagtaaatgaaaaatctaaattggcagagattgaggaaattaaatgtggacaagaa
aaataaattgctaaattgagtgaagaacctaagtctcacaagcaagaaagcataaaggag
gtaacaaatctcaaggatgccagacagcttctgattcaacagaaattagagcttcaaggg
aaagtagattccctgaaggcaacccttgaacaagagaagaaaaaccagcaaatgttaaaa
gagcagatgaaaaaggaagaagatgagctgaagagagaatttatggagaaggaaactaaa
ctgcattctgaaataaaagaaaaagcagcagcagtgcagaagcatgaggaaaacgaggcg
aaacgtaccatgcagatgaccgcattaaacgaaaacctgggcacggtcaagaaggagtgg
cagtccagccagcggcgcgtcagtgagctcgagaagcagagggacgcggagcttacgggg
gaaatcgcagtgctggaagccaccgttcagaataatcaagatgaaagaagggcactacta
gaaaggtgtcttaaaggagaaggtgaaatagaaaagcttcaaaccaaagtactagagttg
caaagaaagctggataatacaactgcagcagtgcaggagctgggcagagagaatcagtcc
cttcagatcaagcatacacaagcactgaacagaaagtgggccgaagacaatgaagtgcag
aactgcatggcctgtgggaaaggcttctcagtcacagtgcgacggcatcactgcagacaa
tgtggaaatatcttctgtgctgagtgttcagccaaaaatgccttaactccttcttctaag
aagcctgttcgtgtctgtgattcatgtttcaatgacttgcaaggataa
DBGET
integrated database retrieval system
