Sus scrofa (pig): 100153477
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Entry
100153477 CDS
T01009
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C isoform X4
KO
K06842
semaphorin 6
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100153477 (SEMA6C)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100153477
NCBI-ProteinID:
XP_003125816
Ensembl:
ENSSSCG00000006635
UniProt:
A0A8D1AV11
A0A480LR33
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Position
4:98107316..98121464
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AA seq
966 aa
AA seq
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MPRTPYFMPLLLLLLLLSLPHTQAAFPQDPLPLLTSDLQGISPLSWFRGLEDDAVVAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTWRSQDMENCAVRGKLTDE
CYNYIRVLVPWNSQTLLACGTNSFSPMCRSYGITSLQQEGEELSGQARCPFDATQSNVAV
FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFF
REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
QALTGPVNLYGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPV
SEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLTSR
ALLTQVAVDGMAGPYRNTTVLFLGSSDGTVLKVLPPGGQSGAHEPILLEEIDAYSPSRCS
GKRAAQTARRVIGLELDTEGHRLFVAFSGCIIYLPLSRCARHGACRRSCLASQDPYCGWD
SSRGCVDIRGPGGTDVDPAGKQESMEVDDCQDGATGSQSGTGDSTYVLLGRDPSPETPSP
PSDAQPRPQSSTLGAHTQGVRRDLPPASASRSVPIPLLLACVAAAFAMGASVSGLLVSCA
CRRAHRHRSKDIESPGLPRPLSLRSLARLHGAGPEPPPPPKDGEGALTPQLYTTFLPPPE
GVPPPELACLPTPESTPELPVKHLRHPGGPWEWNQNGNNAKEGRGRTRGGNATGGPAPRV
LVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKEAEPPAAAPFTSRALPPEPTPSPTLF
AGSCLLPRDCAPPRRLDVPPEGKGPAPAARPALSAPAPRLGVGGSRRLPFSTHRAPPALL
TRVPSGGPSRYSGGAGKHLLYLGRPDGYRGRALKRVDVEKSQGPSKPPLVGPPSQQVVPN
GSHFNF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaccccctacttcatgcccttgctgctactgctgctgctcctctcacttccc
cacacccaggcggcctttccccaggaccccctccctctactgacctctgacctacaaggt
atttctccattatcctggttccggggcttggaggatgatgctgtggttgcagaacttggg
ctggactttcagagattcctgaccctgaaccggaccttgctagtggctgcccgggatcat
gttttctcctttgatcttcaagcccaagaagaaggggagggcctagtgcctaacaagtat
ctaacatggaggagccaagacatggagaactgtgccgtgcgggggaagctgacggacgaa
tgctacaactacattcgtgttcttgttccctggaactcccagacactccttgcctgtgga
acgaactcattcagccccatgtgccgcagctatgggataacttcgctgcagcaggagggt
gaggagctgagtgggcaggctcgatgcccctttgatgccacccaatccaatgtggccgtc
tttgcagagggcagcctgtattcagccacagctgcggatttccaagccagtgatgctgtg
gtttacagaagccttgggcctcagcccccactccgctccgccaagtacgactccaagtgg
ctccgagagccacactttgtccatgctttggagcatggagaccacgtctacttcttcttc
cgagaggtctctgtggaggatgctcggctggggagggtgcagttctcccgtgtggcccgc
gtatgtaagcgtgacatgggaggctcacctcgggccttggaccgccactggacatccttc
ctgaagctgcggctcaactgctctgtccctggggactctaccttctattttgacgtctta
caggccttgacagggcctgtgaacttgtatggccgctctgctctctttggggtcttcacc
acccagaccaatagcatccctggctctgcagtctgcgccttctacctggatgatattgaa
cgtgggtttgagggcaagttcaaggagcagaggagtctggatggggcctggacccccgtg
tctgaggacagggtcccctcccccaggccaggatcctgtgcaggagtaggtgtagctgcc
ttgttcccctcttctcgagacctccctgatgatgtcctgaccttcatcaaggctcaccca
ctcctggaccctgccgtgccacctgccacccatcagcctctgcttacccttaccagcagg
gcgctactgacccaagtagctgtggatggcatggctggtccctaccgtaatacaacggtc
ctgttccttggctccagtgatgggacagtgctgaaggtgctgcccccaggggggcaatct
ggggcccatgagcccattctgttggaagagatcgatgcctacagcccctcccggtgcagt
gggaagcgagcagctcaaacagcaaggcgggtcataggactggagctggacactgaaggt
cacaggctttttgtagctttttctggctgtatcatctacctccctctcagtcgatgtgcc
cggcatggggcctgtcggaggagctgtctggcttctcaggacccatactgtggatgggat
agctccagaggctgtgtggatatcaggggacctggtgggactgatgtggatccagctggg
aaacaggaatccatggaagttgatgactgccaagatggagctactggaagtcagtctggc
acaggtgattctacttacgtgcttctgggtcgtgacccctcccctgagacccccagcccc
cccagtgatgcccaaccccggccccagtcttccactcttggagctcacactcagggcgtg
cgccgagacctccccccagcctcagcctcccgctcggtccccatcccactccttctggcc
tgtgtggctgcagccttcgccatgggcgcctcggtctctggcctcttggtctcctgcgct
tgtcgccgcgcccaccgacatcgaagcaaggacatcgagagtccagggctcccgcgccct
ctttcccttcgtagcttggcccggctgcacggggcgggcccagagccgccgccgccgccc
aaggacggagagggggcgctgacgccccagctctacaccaccttcctgcctcctcccgag
ggcgtacccccgccggagctggcctgcctgcccaccccggagtccacgccggagctgccg
gtcaagcaccttcgccacccgggagggccgtgggagtggaatcagaacgggaacaacgcc
aaggaaggccggggccgcacccggggcggcaacgcgaccggcggtcccgcgccgcgcgtg
ctggtgaggccgccgccgcctggctgtcccgggcaggccgtggaagtcaccaccctggag
gaactgctgcgctacctgcacggcccgcagccgcctaggaaggaggctgagcccccggcc
gccgcccctttcacctcgagggcgctgccgcccgagcccacccccagccccaccctcttt
gccggctcctgcctgctccctcgggactgtgccccgcctcggaggctggacgtgccgccg
gagggcaagggcccggcccccgccgccaggcctgcgctctctgcccccgctccccggctc
ggggtcggcggtagccggaggttgcccttctccacgcaccgtgcaccccccgcgctgctc
acccgagtcccctcgggaggcccctccaggtactctgggggtgccgggaaacacctcctg
tacctgggccggcctgacgggtaccggggccgcgccctcaagagggtggacgtcgagaag
tctcaagggccctcgaagcctcccctcgtcgggcctccctcccagcaggtcgtccctaac
ggcagccatttcaacttttaa
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