Sus scrofa (pig): 100153561
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Entry
100153561 CDS
T01009
Symbol
SNX1
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100153561 (SNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100153561 (SNX1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100153561 (SNX1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Macropinocytosis
Sorting nexins
100153561 (SNX1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100153561 (SNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
Sorting_nexin
PX
BAR_3_WASP_bdg
MVD-like_N
HR1
Motif
Other DBs
NCBI-GeneID:
100153561
NCBI-ProteinID:
XP_020949569
Ensembl:
ENSSSCG00000004556
ENSSSCG00000025145
UniProt:
A0A8D1M1F9
A0A480LB97
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Position
1:complement(107903954..107949920)
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AA seq
522 aa
AA seq
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MASGGGGCSASERLPPPFPSLEPEFEGATGGSEPEAGDSDTEGEDIFTGAAAASKPQSPK
RIASLLPINNGSKENGIHEEQDQEPQDLFADATVELSLDSTQNNQKKLPAKTLISLPPQE
ATNSSKLQPSYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSKQ
FSVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRA
ALERYLQRIVNHPTMVQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTI
KMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDN
TALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRW
QDAQATLQKKREAEARLLWANKPDKLQQAKDEIIEWESRVTQYERDFERISTVVRKEVIR
FEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEAFLPEAKAIS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggtggtggtggctgtagcgcttcggaaagactccctccccccttccccagc
ctggaaccggagttcgagggggcgacaggggggtcggaacccgaggcgggggacagtgac
accgagggggaggatattttcaccggcgccgcggcggccagtaagccccagtctccaaag
agaattgcttcccttcttcccatcaacaatggctccaaagaaaacggtatccatgaggaa
caagaccaagagccacaggatctctttgcagatgccacagtggagctatccttggacagc
acacaaaataatcagaagaagctgccagccaaaacgctcatttctcttcctccacaggaa
gccacaaattcttctaagctccagccaagctatgaggagctagaggaagaagaacaggaa
gaccagtttgatttgacagtcggcataactgatcctgagaaaataggggatggtatgaat
gcctatgtggcctacaaagttacaacacagacgagcttaccaatgttcagaagtaaacag
ttttcagtgaaaagaagatttagtgactttctgggtctttacgagaagctttcagagaaa
cactcccagaatggctttattgtccctcctccaccagagaaaagcctaataggaatgacg
aaagtaaaagttgggaaggaagattcttcttctgcagagtttcttgaaaaacggagggct
gccctagaaaggtaccttcagaggattgtgaatcatcctaccatggtacaggaccctgat
gtcagggagttcttggaaaaagaggagctgccacgcgccgtgggtacccagacgttgagt
ggcgctggtctcctcaagatgttcaacaaagccacagatgcggtcagcaaaatgaccatc
aagatgaatgaatcagacatttggtttgaggagaagctccaggaggtagaatgtgaggag
cagcgcttacgcaaactgcatgccgttgtagaaactctagtcaaccacagaaaagagcta
gcgctgaacacagcccagtttgcaaagagtcttgccatgctcgggagctctgaggacaac
acagccttgtcacgggcactctcccagctggctgaggtggaagagaagattgagcagctc
caccaggaacaggccaacaacgacttcttcctccttgccgagctcctaagtgactacatt
cgcctcctggccatagtccgcgccgcctttgaccagcgcatgaagacgtggcagcgctgg
caggacgctcaagccacactgcagaagaagcgggaggccgaggctcggctgctgtgggcc
aacaagcctgacaagctgcagcaggccaaggacgagatcatagagtgggagtctcgggtg
acccagtatgaaagggactttgaaaggatttcaactgtggtccgaaaagaagtgatacgg
tttgagaaagagaaatccaaggacttcaaaaaccacgtgatcaagtaccttgaaacactc
ctgtattcacagcagcagctggcaaagtactgggaagccttccttcctgaggcaaaggcc
atctcctaa
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