Sus scrofa (pig): 100153581
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Entry
100153581 CDS
T01009
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc03250
Viral life cycle - HIV-1
ssc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100153581 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100153581 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100153581 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100153581 (NUP153)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100153581 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
100153581
NCBI-ProteinID:
XP_001926686
Ensembl:
ENSSSCG00000026034
LinkDB
All DBs
Position
7:complement(13393542..13466577)
Genome browser
AA seq
1474 aa
AA seq
DB search
MASGAGGLGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
KNEDVCSCSTDTREVPQWPENREDDHTMYADEEGASVHDGRITPEPTVSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSVPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTL
SPSLGNSSILKTSQLGDSPFYPGKTMYGGAAAAVRQPKLQNTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSVFSSLNSSLDRSGIDNTTDLQAKRRKVDS
QNPPVQGLMTPKPVSIAANRTVYFKPSLTPSGELRKTNQRVDKKHSTGYEKNMSPGQNKE
RESGFSYPNFSMSAANGLSSGVGSGGGKMRRERTRFVASKPQDEEEMEVPVLPKISLPIT
SSSLPTFNFSSSVITTSSPSPISPSQSLTNKVQMTSPNSTGSPLFRFSSPIVKSTEADVL
PPSSIGFTFSVPVAKTELSGSSTISEPIMSSSAEDITAVNNSTSCKKADEDGEGLFRPAK
TLKEGSVLDVLKNPGFTSPKADSPAAQPTTTSPIVYTRPAISSSSSSGIGFGESLKAGPS
WQCDTCLLQNKVADNKCVACQATKLPPRDTAKQLGTGTPSKSGKPTLSSPGTGFGDKFKP
AVGTWDCDTCLVQNKPEAIKCVACETPKPGTGVKRVFTLPVASESAVTMAASSSSCTVTT
GALGFTDKFKRPMGSWECPVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSVLSGG
SLGLDKFKKPEGNWNCDVCLVENKADSTKCIACESAKPGTKSEFKGFGTSSSSLNPATSS
FKFGIPSSSSAPSQTLTNTGNFKFGDQGGFKIGVSSDLGSVNPMSEEGFKFPKPIGDFKF
GVSSDSKPEEVKKDSKNDNNFKFGLSSGLSNPAPLAPFQFGVSNLGQQEKKEEVPESSSA
GFSFCSGVINPPPLAADTKVTSESKNSFSFGTTDTKSVSVAPFTCKTPEAKKEETPVTKG
GFTFGSMDSAPLPSASFVLGRTEEKQQEPVTSTSLVFGKKVDTEEPKCQPVFSFGNSEQT
KDEGSSKSTFSFSTAKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNNSSNSS
TPATSAGGGIFGSSTTSSSAPVAAFVFGQASNPVSSSAFGNSAESSTSQSLLFSQESKPA
TTSSTGTAVTPFVFGPGPSSNNTATSGFTFGATTTSSSAGSSFVFGTGPSAPSASPAFGA
NQTPTFGQSQGASQPNPPGFGSIASSAALFSAGSQPAPPTFGTVSSSSQPPVFGQQPSQS
AFGSGTAPNSSSVFQFGSSTTNFNFTNNNPSGVFTFGANPSIPAASAQPSGSGGFPFNQS
PGAFTVGSNGKNIFSSSGTSLSGRKIKTAVRRRK
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccggaggcttaggagggggcggtggcggcaagatccggacgcggcgt
tgccaccaggggccaattaagccttaccagcaggggcgacaacagcaccagggcattctt
agcagggttacagaatctgttaagaatattgtgccaggatggctacagagatacttcaac
aagaatgaagatgtgtgtagctgctcaacagacacaagagaggtgccacagtggccggaa
aacagggaagatgaccatacgatgtatgcagatgaggagggcgccagtgttcatgatggg
aggatcactcctgaaccaacagtcagtaatacagaagaaccctcaacaactagtactgct
tcaaattatccagatgtattaacaaggccttctcttcatcggagccatctgaatttctcc
atgttggaatctcctgcgttacactgtcagccctccacatcctcggcgttcccaattggc
agttctggattttcccttgtaaaggagattaaagattctacctctcagcatgatgatgat
aacatctcaaccaccagtggtttttcttcaagagcttctgataaagatatagctgtgtca
aagaacacttcagtgccacctctgtggtccccagaggctgaacgttctcattccctctca
cagcacactgccaccagctcaaaaaaaccagcattcaacttgtctgcctttggaacactt
tctccttcacttgggaattcttcaatccttaaaacaagtcagcttggagattctcctttt
taccctggaaaaacaatgtatggtggagcagcagctgctgtgagacagcctaaactgcaa
aacacaccatatcaggcaccagtcagaagacagatgaaagctaagcaactcaatgcacaa
tcctatggtgtgactagttcaacagctcggagaattttgcagtctttagagaagatgtca
agccctctagcggatgcaaaaagaattccatctgttttttcttctctgaattcttctctt
gataggagtgggatagataacaccacagacttgcaggccaaaaggagaaaggtggattct
cagaacccccctgttcagggactcatgaccccaaagccagtttccatagcagcaaatcga
actgtttactttaaaccatctctgacaccatctggtgaattaaggaagactaatcaaaga
gtagataaaaagcacagtactggctatgaaaaaaatatgtcaccaggacagaataaagaa
cgagagagtggcttttcttacccaaatttcagtatgtctgcagccaatggtttatcttct
ggagtaggtagtggaggtggcaagatgagacgagagagaacccgctttgtggcatctaaa
cctcaggacgaggaggaaatggaagtaccagtattaccgaaaatctctctacccattaca
agttcttcactgcctaccttcaattttagctcttctgtgatcacaacttcctctccatca
cctattagtccttcacaatcattaacaaacaaggtgcagatgacctctccgaacagcact
ggcagtcccttgtttagattttcatctccaattgtaaaatctactgaggcagatgtacta
cctccatcatccattggatttacatttagtgtgcctgtggcaaaaacagaactttctggc
tctagtactatttcagaaccaattatgagtagttcagctgaagatatcactgcagtgaac
aacagtacaagttgtaagaaggcagacgaagacggcgagggccttttcagacctgcaaaa
accctgaaagaaggaagtgttcttgatgttctgaagaaccctggtttcacatcaccgaag
gcagattctcctgctgctcagcctaccaccacaagcccaatagtttatacaagaccagca
ataagtagctcttcttccagtggaatcgggtttggggaaagtttaaaggctgggccatca
tggcagtgtgatacttgtctactccagaacaaagttgcagacaacaaatgtgtagcctgt
caagcaacaaagttgccaccaagagatactgctaaacagttgggaactgggacaccaagt
aaaagtggcaaaccaactctttcttcaccagggacaggcttcggagacaaatttaaacca
gcagtaggaacttgggattgtgatacttgtttagtgcaaaataaacctgaagcgataaaa
tgtgtagcttgtgaaacaccgaaacctggaactggtgttaaacgagtctttacgttgcca
gtggcttcagaaagtgctgtaaccatggctgcttcctcctccagctgcactgtaaccact
ggtgccttaggatttacagataaattcaaaaggcccatgggatcttgggagtgtccagtg
tgctgtgtttctaataatgcggaagacaataaatgtgtgtcctgtatgtctgagaaacca
ggaagttcagtacctgcttcaagtagcagcactgtccctgtctctgtgttgtctggaggc
tccctaggattggacaagtttaagaaacctgagggaaactggaactgtgatgtgtgccta
gtggagaataaagcagattccaccaaatgtatagcatgcgaaagtgcaaaaccaggcacc
aagtctgagtttaaaggctttggcacatcttcctcatctttgaacccagcaacctcatcc
ttcaaattcggtatcccatcatcctcttctgcaccctctcagactttaacaaacactgga
aattttaaatttggagatcaaggaggcttcaaaataggtgtgtcatcagatttggggtct
gtaaaccccatgagtgaagaaggctttaaatttcctaaaccaataggagattttaaattt
ggagtttcatctgattctaagcctgaagaagttaaaaaagacagtaaaaatgataataat
tttaagtttggactttcttctggtttaagcaatccagctcctttagctccatttcagttt
ggggtgtctaatcttgggcagcaagaaaagaaagaggaagtgcctgaatcttcctctgca
ggctttagcttttgttccggtgtcattaaccctccccctcttgctgctgacaccaaagtg
acctctgagagcaagaacagcttcagttttggaaccacagacaccaagagtgtctcagtg
gctcctttcacatgtaagacaccagaagcaaaaaaagaagaaacacctgtcaccaaagga
gggttcacttttggcagcatggactctgcccccctgccctctgcctcgtttgttttggga
aggacagaagagaaacagcaagagcctgtcacttctacttctctggtatttgggaagaaa
gtggacactgaagagccaaagtgtcagccagtgttttcctttgggaattcagagcaaacc
aaagatgaaggttcttccaagtcaacttttagtttcagtacggcaaaaccatccgagaaa
gaatctgagcagccagcaaaggccacttttgcttttggagcgcaaaccagtactacagct
gatcaaggtgcagcaaagccagtttttagtttcttgaacaacaattcttccaattcaagt
acaccagccacttcagctgggggaggcatttttggtagttccaccacgtcctccagtgca
cctgtggctgcctttgtgtttggacaggccagcaatcctgtgagcagctctgcctttggt
aactcggccgaatccagtacatcccagtctttgctgttttctcaagagagcaaaccagca
accacatccagcacgggtacagctgtcaccccatttgtctttggtcctggacccagcagt
aataatactgcaacctctggtttcacctttggagctacaaccacatcaagctctgcagga
tcctcctttgtctttggcactggaccttcagcaccatctgccagtccagcgtttggtgct
aaccagaccccaacatttggtcaaagtcaaggtgccagccagcctaatcccccaggcttt
ggatctatagcatcttcagcagcattattttctgctggttctcagcctgcaccacctact
tttgggacagtgtcgagcagcagccagcctcctgtgtttggacagcagcctagtcagtct
gcatttggctctggaacggctcctaattccagttccgttttccagttcggtagcagcact
acaaatttcaacttcacaaacaacaatccatcaggagtgttcacatttggtgcaaatccc
agcatacctgcagcctcagcccagccctcgggctcagggggctttccatttaaccagtct
ccaggggcgtttactgtggggtcaaatgggaaaaacatattctcttcttcgggaacttca
ctctctggtcgcaagataaagactgctgtaagacgcaggaaataa
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integrated database retrieval system
