Sus scrofa (pig): 100153677
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Entry
100153677 CDS
T01009
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100153677 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100153677 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100153677 (CLIP1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100153677 (CLIP1)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
100153677 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
100153677
NCBI-ProteinID:
XP_020928617
LinkDB
All DBs
Position
14:30320870..30467095
Genome browser
AA seq
1439 aa
AA seq
DB search
MSMLKPSGLKAPTKILKPGSTALKTPAVVVPIEKTISSDKASSTPSSEAQEEFVDDFRVG
ERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP
SKLTRKVQAEDEADGLQTTQASRATSPLSTSAASMVSSPPATSSNIPHKSSQPTAKEPSA
TSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEW
CGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMA
TTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQ
QHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD
REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENTQTKLEHARIKELE
QSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVTELRRRLESSKPAGD
VDMSLSLLQEISSLQEKLEATHTDHQKEMASLKEHFGAREETHQKEIKALQAATEKLSKE
NESLKGKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAELAELKT
QIEKMRLDYQHEIESLQNKQDSERSAHTKELEALRAKLMKVIKEKENSLEAIKSKLDRVE
DQHLVEMEDTLNKLQEAEIKVKELEVLQAKCKEQTKVIDNFTSQLKAAEEKLSDLDALRK
ASSEGKSEIENLRQQLEAAEKQIKNLEIEKNAESGKASSITKELQGKELMLNNLQENLSE
VSQVKEALEKELQILKEKFADASEEAVSVQRSMQETVNQLHQKEEQFNALSSELEKLREN
LTDMEAKFRERDEREEQLIKAKEKLENDIAEIMKMSGDHSSQLTKMNDELRLKERNVEEL
QLKLTKANENASFLQKSIGEVTLKAEQSQQEAAKKHEEEKKELLQKLSDLEKKMEMSHNE
CQDLKARYEEASSEAKAKHEEVLQNLQKTLLDTEERLKAAQEENSDLLQEMEELEKQAGK
ARAAQTAEDAMQIMEQMTKEKTETLASLEDSKQTNEKLQNELDTLKENNLKNVEELNKSK
ELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEE
ERSVLNNQLLEMKKRESKLIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRG
ENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAEEDERAQES
QQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNSYDSDDQEKQSKKKPRLFC
DICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCEICEMFGHWATNCNDDETF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgctaaaaccaagtgggcttaaggccccaaccaagatccttaagcctggaagc
acagccctcaagacaccagctgttgtagttccaatagaaaaaacaatatccagtgacaaa
gcatcaagcactccatcctctgaagcacaagaggagtttgtggatgactttcgtgttggg
gagcgagtttgggtgaatgggaataaacctggatttatccagtttctgggagaaacccag
tttgcaccaggccagtgggccgggatcgttttagatgaacccataggcaagaatgacggt
tcagtggccggagttcggtatttccagtgtgagcctttaaagggcatattcacccgacct
tcaaagttgacgaggaaggtgcaggcagaagatgaagctgacggcctgcagacaactcag
gcttcccgagctacttcgcccctgtccacttcggcagccagcatggtatcctctcctcca
gccacctcctcaaacattcctcataaatcgtctcagccaactgcaaaggagccctcggcc
acgtctcagatcagcaaccttacaaaaactgctagtgaatctatctccaacctttcagag
gccggctcaatcaagaaaggagaaagagagctcaaaatcggagaccgagtgttggttggt
ggcacgaaggctggtgtggtccggtttctgggggagacagacttcgccaagggggagtgg
tgtggtgtggagttggatgagccactggggaagaatgacggggctgttgccggaaccagg
tattttcaatgtcaacccaaatatggcctgtttgctcctgtccacaaagtgaccaagatt
ggcttcccttccaccacaccagccaaagccaaagctgctgctgtgaggcgggtgatggca
accactcccgccagcctgaagcgcagcccctccgcctcctctctcagctccatgagctcc
gtggcctcctccgtgagcagcaagcccagtcggacaggattgttgactgaaacctcgtcc
cgttacgccaggaagatctccggcaccaccgccctccaggaggccctgaaggagaagcag
cagcacattgagcagctgctggctgagcgggatctggagagggcggaggtggccaaggcc
acaagccacgtgggggagatagaacaggaactagctctggcccgggatggacacgaccag
cacgtcctggagctggaggccaagatggaccagctacgaacgatggtggaagctgccgac
agggagaaggtggagctgctcaaccaacttgaagaggagaaaaggaaggttgaggacctt
cagttccgagttgaggaagaatcaattaccaagggggatcttgagcaaaagagccagatt
tctgaagatcctgagaatacgcagaccaaactggagcatgcccgcattaaggagcttgaa
cagagcctgctctttgaaaagaccaaagctgacaaactccagagggagttagaagacact
agggtggccacggtgtctgaaaagtcccgcataatggaactagagaaagacctggcgctc
agagtgcaggaagtaactgagctgcgaaggaggctggagtccagtaagcctgccggggat
gtcgacatgtcactctcccttttgcaagagataagctctttgcaagaaaagttagaagcc
acccacacagaccaccagaaagaaatggcttctctgaaggagcattttggagctcgggaa
gaaacacaccagaaggagatcaaggctcttcaggcggccacagagaagctttccaaagag
aacgagtctctgaaaggcaagctcgatcacgccaacaaggagaactcagacgtgatagcc
ctgtggaagtccaagctggagacggccatcgcgtcccaccaacaggcgatggaggagttg
aaggtgtccttcagcaagggggtcggcacggagacagccgaacttgccgagttaaagaca
caaatagagaagatgaggctagattaccagcacgaaatagaaagcttgcagaacaaacaa
gactccgaaaggtctgctcacaccaaagagctggaagccctaagggctaaactgatgaag
gtcattaaagagaaggagaacagtctggaagccatcaagtcgaagctggacagagtggaa
gaccagcacctcgtagaaatggaggacaccttaaacaaattgcaggaggccgagataaag
gtaaaggagctagaggtactgcaagccaaatgcaaggaacaaaccaaggttattgataat
tttacatcacagctcaaggctgccgaagaaaagctctcggatcttgatgcgcttcggaaa
gccagttccgaaggtaaatcagaaatcgagaaccttagacagcagctcgaggcagctgag
aaacagatcaaaaatttagagattgaaaagaatgctgaaagtggcaaggctagtagcatc
accaaagagctgcagggaaaagagctaatgcttaataaccttcaggaaaacttgagtgaa
gtcagtcaagtgaaagaggctttggaaaaagaacttcagattttgaaagaaaagtttgct
gatgcttcagaggaggcagtctctgttcagagaagtatgcaagaaactgtaaatcaatta
caccaaaaagaggagcaatttaacgcgctgtcttctgagttggagaagttgagagaaaat
ttaacagatatggaggcaaaattcagagagagagatgaaagagaagagcagttgataaag
gcaaaggaaaaattggaaaatgacattgcagaaataatgaaaatgtcaggagaccattct
tctcagctgacgaaaatgaatgatgagttacgtctgaaagaaagaaatgtagaagaatta
cagctaaaacttaccaaggccaatgaaaatgcaagttttctgcagaaaagtattggagaa
gtaactctcaaagctgaacaaagccaacaggaagcagctaaaaagcatgaggaagaaaag
aaagaattgctgcaaaaattgtcagatctggaaaagaagatggaaatgagccacaacgaa
tgtcaggatctgaaagcgaggtatgaggaagccagttctgaggccaaggccaagcatgaa
gaagtcctgcagaacctccagaagacgctgttggacacggaggagcggctgaaggccgcg
caggaggagaacagtgacttgctgcaggagatggaggagctggagaagcaggctggcaaa
gccagagctgctcaaacagcagaagatgccatgcagatcatggaacagatgaccaaagag
aagactgaaaccctggcctccttggaggattccaagcaaacaaatgaaaaactgcagaat
gaattggatacacttaaagaaaacaacttgaaaaatgtagaagagctgaacaaatcaaaa
gaactgctgactgtagaaaatcaaaaaatggaagaattcaggaaagaaatcgaaaccctc
aagcaggcagcagctcagaagtcccagcagctttcagcattgcaagaggagaacgtgaaa
cttgccgaggagctggggagaagcagggacgaagtcacaagtcaccagaagctggaagaa
gagagatctgtgctcaataatcagttgttagaaatgaaaaagagagaatccaagttaata
aaagacgcagatgaagaaaaagcttccttgcagaaatccatcagtattactagtgcctta
ctcacagaaaaggatgcagagctggaaaaactgagaaatgaggtcacggtgctcagggga
gagaacgcctctgccaagtccttgcattcagttgttcagtctctagagtctgataaggtg
aagcttgagctcaaggtaaagaacttggagcttcaactcaaagaaaacaagaggcagctc
agcagctcctcaggtaatactgatactcaggcagaagaggatgaaagagcccaggagagt
cagcaaatgatcgatttcctaaattcagtaatagtggaccttcagaggaagaatcaggac
ctcaagatgaaggtggagatgatgtcggaagcagctctgaatgggaacggcgacgacctg
aacagttacgacagcgatgatcaggagaaacagtccaagaagaaacctcgcctcttctgt
gacatatgtgactgctttgacctccatgacacagaggattgtcccacccaggcacagatg
tctgaggaccccccccattccacacaccacggcagtcggagcgaggaacgcccctactgt
gaaatctgtgagatgttcgggcactgggcaaccaactgcaatgatgacgagaccttctga
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integrated database retrieval system
