Sus scrofa (pig): 100153801
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Entry
100153801 CDS
T01009
Symbol
NGEF
Name
(RefSeq) ephexin-1 isoform X1
KO
K07525
neuronal guanine nucleotide exchange factor
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100153801 (NGEF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100153801 (NGEF)
Membrane trafficking [BR:
ssc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100153801 (NGEF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SOS1_NGEF_PH
SH3_9
SH3_2
PH
SH3_16
Motif
Other DBs
NCBI-GeneID:
100153801
NCBI-ProteinID:
XP_020930563
Ensembl:
ENSSSCG00000016295
ENSSSCG00000016296
UniProt:
A0A287AV01
LinkDB
All DBs
Position
15:complement(133332715..133460161)
Genome browser
AA seq
823 aa
AA seq
DB search
MGPRKANTQAGSDCHGHGASAGPGGSEGRECFPGSLSQERTKPLAARSLQQREGFRTHWP
APRSPQHRRTGEQEPSGLPPPGTPQQQGRALKTRDIGEGLLISPSPSAKKIIGLLSMETR
DSEDLGKPQKKLVSGSWQIDEPATVRPEVLSEERMPHVVQETQDNAPHYYIPIQRNSIFN
RTVRHRSKSNTGGTPERNTTPPADSLENGKSVNETLTLNFPQSRSGPWRIPTQTHPRAKR
TSESSSTPGNGATPEECPALADSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKS
TLQEIETRRQQDAEIQGNADRSPASEEAPEEDEEEEEEELPSPPERKALPQICLLSNPHS
RFNLWQDLPEIRSSGVLDILQPEEIRLQEAMFELVTSEASYYKSLSLLVSHFMENERLKK
LLHPSEAHILFSNVLDVMGVSERFLLELERRMEENIVISDVCDIVYRYAANHFSVYITYV
SNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPLSSFLILPFQRITRLKLLVQNIL
KRVEESSEREATALDAHKELELVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHS
RWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGL
LRVEELEDQGQTLANVFILRLLENADDREATYMLKATSQSEMKRWMTSLAPNRRTKFVSF
TSRLLDCPQVQCVHPYVAQQPDELTLELADILNILDKTEDGWIFGERLHDQERGWFPSNM
AEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggggcccaggaaggcaaacacccaggcaggaagtgattgtcacgggcacggggccagt
gcggggccaggcgggtctgaaggtcgggaatgctttcccgggagcctctcccaggagagg
acaaagcctctggctgcacgctctctgcaacagagggagggcttccggacccactggcct
gctccgaggtccccacagcacagacggacgggagagcaagagccgtcggggctgccaccc
ccaggaactcctcagcagcagggcagagccctcaaaaccagggacattggagaagggtta
ttgatctcccccagtccttctgccaagaaaataattgggcttctttccatggagaccagg
gactctgaggatttggggaaaccccagaagaaattagtgagtggctcatggcagattgat
gagccagccactgtgagacctgaggtcctctcagaagaaaggatgccccatgttgtccag
gagacgcaagacaatgcacctcattactacatcccaatccagaggaactccatcttcaac
cgaactgtgagacacagaagcaaaagcaacactggaggcactcctgagcggaacaccacc
cccccggcagattcactggaaaatggaaaatctgtaaatgagaccctgaccttgaatttc
ccccagagcagatcgggtccctggagaataccaacacagacacacccacgagccaagaga
acgagcgagtcatcctccaccccgggaaatggggccacacccgaggagtgcccggccctc
gccgacagccctaccacgctcaccgaggccctgcagatgatccatcccattcccgcagac
tcctggagaaacctcatcgaacaaatagggctcctgtatcaggaataccgagataaatca
actctccaagaaatcgaaaccaggaggcaacaggatgcagaaatacaaggcaatgccgac
cggtccccagccagcgaggaggctccggaagaggacgaagaggaggaggaggaggagctg
ccaagcccgcccgagaggaaggccttgccccagatctgcctgctcagcaacccccactcc
agatttaacctctggcaggatctcccggagattcggagcagcggcgtgctggacatcctc
cagccagaggagatcagactgcaggaggccatgttcgagctggtcacttccgaggcctcc
tactacaaaagcctgagcctgctggtgtcgcacttcatggagaacgagcggctgaagaag
ctcctgcacccgtcggaggcgcacatcctcttctccaacgtgcttgacgtcatgggcgtc
agcgagcggttcctcttggagctggagcgccggatggaagagaacattgtcatctcggac
gtgtgtgacattgtgtaccgctacgccgccaaccacttctccgtctacatcacctacgtc
agcaaccagacctaccaggagaggacctacaagcagctgctccaggagaaggcagccttt
cgggagctgatcgcacagctggagctggaccccaagtgcagggggctgccgctgtcctcc
ttccttatcctgcctttccagaggatcacacgcctcaagctcttggtccagaacatcctg
aagagggtggaagaaagttctgaacgggaagccactgccttggatgcccacaaggaactg
gagctggtggtaaaagcctgcaacgagggcgtcaggaaaatgagccgcacggagcagatg
atcagcattcagaagaagatggagtttaagatcaagtcggtgcccatcatctcccactcg
cgctggctgctgaagcagggcgagctgcagcagatgtcgggccccaagacatcccggacc
ctgcggaccaagaaactcttccgggaaatttacctcttcctcttcaacgacctgctggtg
atctgccggcagattcccggagacaagtaccaggtgtttgactcggccccacggggcctg
ctgcgggtggaggagctggaggaccagggccagacgctggccaacgtcttcatcctgcgg
ctgctggagaacgcggatgaccgggaggccacctacatgctgaaggcgacctctcagagc
gagatgaagcgctggatgacctcactggcccccaaccgaagaaccaagtttgtctctttc
acatcccggctgctggactgcccccaggtccagtgcgtgcacccgtatgtggcccagcag
ccagacgagctgaccctggagctggccgacatcctgaacattctggacaagacggaggat
gggtggatctttggcgagcgtctgcacgaccaggagagaggctggttccccagcaacatg
gctgaggagatcctgaaccccaagattcggtcccagaacctcaaggaatgtttccgtgtc
cacaagatggatgacccccagcgcagccagaacaaggaccgcaggaagctgggcagccga
aatcggcaatga
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integrated database retrieval system
