KEGG   Sus scrofa (pig): 100153817
Entry
100153817         CDS       T01009                                 
Symbol
CLDN20
Name
(RefSeq) claudin-20 precursor
  KO
K06087  claudin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03272  Virion - Hepatitis viruses
ssc04382  Cornified envelope formation
ssc04514  Cell adhesion molecules
ssc04530  Tight junction
ssc04670  Leukocyte transendothelial migration
ssc05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100153817 (CLDN20)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100153817 (CLDN20)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100153817 (CLDN20)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100153817 (CLDN20)
  09158 Development and regeneration
   04382 Cornified envelope formation
    100153817 (CLDN20)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    100153817 (CLDN20)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100153817 (CLDN20)
   04147 Exosome [BR:ssc04147]
    100153817 (CLDN20)
   04515 Cell adhesion molecules [BR:ssc04515]
    100153817 (CLDN20)
Cilium and associated proteins [BR:ssc03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100153817 (CLDN20)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100153817 (CLDN20)
  Exosomal proteins of colorectal cancer cells
   100153817 (CLDN20)
Cell adhesion molecules [BR:ssc04515]
 Immunoglobulin superfamily
  L1 family
   100153817 (CLDN20)
SSDB
Motif
Pfam: PMP22_Claudin
Other DBs
NCBI-GeneID: 100153817
NCBI-ProteinID: NP_001153249
Ensembl: ENSSSCG00000004067
UniProt: C3VMW6
LinkDB
Position
1:complement(11617807..11618550)
AA seq 219 aa
MASAGLQLLAFALALSGVSGVLTATLLPNWKVNVDAGSNIITAIVQLQGLWMDCTWYSTG
MFSCSLKDSVLGLPTHVQAARAAMVLACVLSALGICTCTVGMKCTRLGGDRESKSHTCFA
GGVCLVSAGISSLTPTVWYTKEIIANFLDLTVPESNKHEPGGAVYIGFISAMLLFISGLI
FCTSCVKKRAEALLYPSKQQHIPISQPEDNSAYSLKDYV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcttcggcgggtctccagctcctcgctttcgccctggccttatctggggtctctggg
gtcctcacggccactctgctgcccaactggaaggtgaatgtggacgcgggctccaacatc
atcacggccatcgtgcagctgcaagggctgtggatggactgcacgtggtacagcactggg
atgttcagctgctccctgaaggactccgtcctgggcctccccacccacgtgcaggccgcg
cgggccgccatggtgctggcctgcgttctgtctgctctggggatctgcacttgcacagtg
gggatgaagtgcactcgcttaggcggggacagggaaagcaagagtcacacctgttttgct
ggaggcgtctgcctcgtgtctgcgggcatctccagtctcacacccacagtgtggtacacc
aaggagatcatcgccaactttctggatctgacggttccagaaagcaacaaacatgaaccc
ggaggagcggtctacatcggattcatttccgccatgctgctgtttatctctggcctgatt
ttctgcacatcttgtgtgaaaaagagagcagaagctttgctctacccatccaagcagcaa
catatccccatctcgcagccagaggacaattcagcatacagcctgaaggattacgtgtaa

DBGET integrated database retrieval system