Sus scrofa (pig): 100153817
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Entry
100153817 CDS
T01009
Symbol
CLDN20
Name
(RefSeq) claudin-20 precursor
KO
K06087
claudin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03272
Virion - Hepatitis viruses
ssc04382
Cornified envelope formation
ssc04514
Cell adhesion molecules
ssc04530
Tight junction
ssc04670
Leukocyte transendothelial migration
ssc05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100153817 (CLDN20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100153817 (CLDN20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100153817 (CLDN20)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100153817 (CLDN20)
09158 Development and regeneration
04382 Cornified envelope formation
100153817 (CLDN20)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100153817 (CLDN20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100153817 (CLDN20)
04147 Exosome [BR:
ssc04147
]
100153817 (CLDN20)
04515 Cell adhesion molecules [BR:
ssc04515
]
100153817 (CLDN20)
Cilium and associated proteins [BR:
ssc03037
]
Other cilia and associated proteins
Stereociliary proteins
100153817 (CLDN20)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100153817 (CLDN20)
Exosomal proteins of colorectal cancer cells
100153817 (CLDN20)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
L1 family
100153817 (CLDN20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
100153817
NCBI-ProteinID:
NP_001153249
Ensembl:
ENSSSCG00000004067
UniProt:
C3VMW6
LinkDB
All DBs
Position
1:complement(11617807..11618550)
Genome browser
AA seq
219 aa
AA seq
DB search
MASAGLQLLAFALALSGVSGVLTATLLPNWKVNVDAGSNIITAIVQLQGLWMDCTWYSTG
MFSCSLKDSVLGLPTHVQAARAAMVLACVLSALGICTCTVGMKCTRLGGDRESKSHTCFA
GGVCLVSAGISSLTPTVWYTKEIIANFLDLTVPESNKHEPGGAVYIGFISAMLLFISGLI
FCTSCVKKRAEALLYPSKQQHIPISQPEDNSAYSLKDYV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcgggtctccagctcctcgctttcgccctggccttatctggggtctctggg
gtcctcacggccactctgctgcccaactggaaggtgaatgtggacgcgggctccaacatc
atcacggccatcgtgcagctgcaagggctgtggatggactgcacgtggtacagcactggg
atgttcagctgctccctgaaggactccgtcctgggcctccccacccacgtgcaggccgcg
cgggccgccatggtgctggcctgcgttctgtctgctctggggatctgcacttgcacagtg
gggatgaagtgcactcgcttaggcggggacagggaaagcaagagtcacacctgttttgct
ggaggcgtctgcctcgtgtctgcgggcatctccagtctcacacccacagtgtggtacacc
aaggagatcatcgccaactttctggatctgacggttccagaaagcaacaaacatgaaccc
ggaggagcggtctacatcggattcatttccgccatgctgctgtttatctctggcctgatt
ttctgcacatcttgtgtgaaaaagagagcagaagctttgctctacccatccaagcagcaa
catatccccatctcgcagccagaggacaattcagcatacagcctgaaggattacgtgtaa
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integrated database retrieval system