Sus scrofa (pig): 100153985
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Entry
100153985 CDS
T01009
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100153985 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100153985 (SIX4)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100153985 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
DUF3108_like
Motif
Other DBs
NCBI-GeneID:
100153985
NCBI-ProteinID:
NP_001231543
Ensembl:
ENSSSCG00000005089
UniProt:
A0A4X1W7E9
A0A286ZV22
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Position
1:complement(189670390..189682378)
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AA seq
785 aa
AA seq
DB search
MSSSSPTGQIASAADIKQENGMESSSEGQEAPREVAGGATAGLSPPAPAPFPLEPGDAAA
AAARVSGEQGAVSAAAAGAAADQVQLHSELLGRHHHAVAAAAAAAQTPLAFSPDHVACVC
EALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESA
NHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNA
LKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTE
DESSKGHEDLSPHPLSGSSDGVTNLSLSSHMEPVYMQQIGNAKISLSSSGVLLNGSLVPA
STSPVFLNGNSFIQGPNGVILNGLSVGNTQTVSLNPPKMASNIVSNGISMTDILGSTSQD
VKEFKVLQSSSANSAATTSYSPSTPMSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTPV
QINQYGIVQIPNSGANSQFLNGSIGFSPLQLPPVSVAASQGNISINSSTSDGSTFTSESA
TVQQGKVFLSSIAPSAVVYTVPNSGQTIGSVKQEGLERSLVFSQLMPVSQNAQVNANLSS
ESISGSGLHPLSSSLVNVSPTHNFSLTPPTLLNPTELNPDIADGQPMSAPVASKSTVTSV
SNTNYATLQNCSLITGQDLLSVPMTQAALGEIVPTAEDQVGHPSPTVHQDFGREHHLVMQ
SVASIKENFLTNSESKATSNLMMLDSKSKYVLEGMVETVCEDLETDKKELAKLQTVQLDE
DMQDL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggatatcaagcaggagaat
gggatggaaagctcctcggaagggcaggaggcaccccgagaagtggcggggggcgcgacg
gcggggctgagccccccggctccagccccctttcccctggagccgggggacgccgcggcc
gccgccgccagggtgagcggagagcaaggggcagtatcggcggcggcggctggagcagcg
gccgatcaggtacaactccactcggaacttctgggcaggcaccaccacgccgtggccgcc
gccgccgctgctgcgcagaccccactggccttctcgccagaccatgtagcctgcgtgtgc
gaggcgctgcagcaggggggcaacctggaccgcctggcccggttcctgtggtccctgccc
cagagcgacctgctacgtggcaacgagagcctgctgaaggcgcgggcgctggtggccttc
caccagggcatctaccctgagctctacagcatcctcgagagccacagcttcgaatcggcc
aaccacccgctgctgcagcagctctggtacaaggcacgctacaccgaggccgagcgagcc
cgcggccggccgctgggcgccgtggacaagtaccggttgcgcaggaaattccccctgccc
cgcaccatttgggacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaacgcg
ctcaaggagctctacaagcagaatcgctacccttcgcccgccgagaagcggcacctggcc
aagatcactggcctctccctcacccaggtcagcaactggttcaagaaccgccggcagcgc
gatcggaacccctctgagacccagtccaaaagtgagtcagatggcaatcctagcaccgaa
gatgaatccagcaagggtcatgaagatttgtctcctcatccactctctggttcatccgat
ggtgttaccaacctcagcctttccagtcacatggagccagtctatatgcaacaaattgga
aatgctaaaatatctttaagctcttctggagttttgttgaacggaagtttggtacctgca
agtacttcacctgtcttccttaatggtaattctttcattcagggacccaatggagttatc
cttaatggattaagtgtgggaaatacacagacagtgtcattgaatccacccaaaatggca
tcaaacattgtgagcaatggtatatccatgactgacatactggggtctacctcccaggat
gtgaaggaattcaaagttctccagagttcttcggctaactcagcagccaccacctcctac
agccccagtactcctatgtcatttccagggctgatacccagcactgaggtgaaaagagaa
ggtattcaaacagtggcttcccaggacggaggctctgtagtgacttttaccacaccagtg
caaattaaccagtatggcatcgtccagatccccaattccggagcaaacagccagttcctt
aatgggagcattggattctctccactgcagctgcctcctgtttcagtggcagcttcacaa
ggtaatatttcaataaattcaagcacttcagatgggagcacatttacaagtgagtccgcc
acagtccagcaaggaaaggttttcttgagctcgattgctcccagtgcagtggtatatact
gttcctaattcaggccagactataggatctgttaaacaggagggcttggagaggagcctg
gtcttttctcagttgatgcctgtcagtcagaatgcacaagtgaatgcaaacctgtcttct
gaaagcatctcggggagtggccttcacccactgtcttcctcattagttaatgtgtcccca
actcacaatttttccctgactccccccaccctactaaatccaacagagctaaaccctgac
attgctgatggccagccaatgtctgcacctgtggcgagcaaatctactgtgacatctgtc
agcaacaccaactatgcaactcttcagaactgctcccttattactggtcaagatctatta
tcagtccccatgacccaggctgcccttggggaaatagttcccacagctgaagaccaggtg
ggtcacccctcccctacagtacaccaggattttggcagagaacatcatttggttatgcaa
tcagtagctagcataaaagagaatttcttaacaaattctgagagcaaagcaacaagcaac
ttaatgatgctggactccaaatccaagtatgtcctagagggcatggttgagactgtctgt
gaagacctggaaacagacaaaaaagagcttgccaagctccagactgtccaattggatgaa
gatatgcaagacttgtga
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