KEGG   Sus scrofa (pig): 100154006
Entry
100154006         CDS       T01009                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100154006 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100154006 (BCAS2)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100154006 (BCAS2)
Spliceosome [BR:ssc03041]
 Complex B
  Other components
   Prp19 complex
    100154006 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    100154006 (BCAS2)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100154006 (BCAS2)
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 NOCA1_mid Tup_N OmpH Ribosomal_L29 Transcrip_act INO80F Mua Relaxase_C DUF3450 PRKG1_interact
Other DBs
NCBI-GeneID: 100154006
NCBI-ProteinID: NP_001231353
Ensembl: ENSSSCG00000006756
UniProt: I6L631 A0A8D1K5T8
LinkDB
Position
4:105992558..106003160
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESTWVSLVSKNYEIERTIVQLENELFQMKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcaccggtttggtggctggagaggttgttgtagacgcgctgccgtattttgac
cagggttatgaagcgcctggtgtgcgggaagcggccgcggcgttggtagaggaggaaact
cgcaggtaccgacctaccaagaactacttgagctacctgacagccccagattattccgct
tttgaaactgacataatgagaaatgaatttgaaagactggctgctcgacaaccaattgaa
ttgctcagtatgaaacgatatgaacttccggccccttcctcaggtcaaaaaaatgacatt
actgcatggcaagaatgtgtaaacaattctatggctcagttggagcatcaggcagttcga
attgagaatctggaactaatgtcacagcatggatgcaatgcctggaaagtatataatgaa
aatctagttcatatgattgaacatgcccagaaagaactccagaaattaaggaaacatatt
caagatttaaattggcaacgaaagaacatgcagctcacagctggatctaaattaagagaa
atggagtcaacttgggtatccctggtcagtaagaattacgagattgaaaggactattgta
caattagaaaatgaactctttcaaatgaagcagcaacatggagaggcaaacaaagaaaac
atacggcaagacttctga

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