Sus scrofa (pig): 100154153
Help
Entry
100154153 CDS
T01009
Symbol
CHD1L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100154153 (CHD1L)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100154153 (CHD1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
SWI2_SNF2
AAA_22
Torsin
ATP-synt_E
Motif
Other DBs
NCBI-GeneID:
100154153
NCBI-ProteinID:
XP_001928553
Ensembl:
ENSSSCG00000006701
UniProt:
F1SDB8
LinkDB
All DBs
Position
4:complement(100264963..100425728)
Genome browser
AA seq
901 aa
AA seq
DB search
MERAEAGTSAGNMPRFLLALQSQSRTEAERARVQEQDLRRWGLTGIHLRPYQLEGVNWLA
QCFHYQNGCILGDEMGLGKTCQTIAVFIYLAGRLNDEGPFLILCPLSVLSNWKEEMERCA
PGLCCVTYAGDKEERAHLQQDLKQESGFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHR
LKNQNSLLHKSLSEFSVAFRLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVEDFVQRYE
DIEKESESASELYKLLQPFLLRRVKAEVAAELPKKTEVVIYHGMSALQKKYYKAILMKDL
DAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAF
LYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFIFL
LSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEI
ICRKAASKLKLTNTIIEGGRFTLGAQRPAAEADLQLSEILKFGLDKLLSSEGSTMDEIDL
ESILGETKDGQWISDALPSTEEGSREQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNL
QKTLLEKTGQEGRLLRNKGSVLIPGLVEGSTQRKRILSPEELEDRRKKRQEAAAKRKRLI
EEKKRKKEEAEHKKKMAWWESNGYQSFCLPSEDSEPEDLEDEAEESSAPLDYADPDSTSI
KYVSGDVTHPQAGVEDAVIVHCVDDSGHWGRGGLFTALEARSAEPRKIYELAGKMKDLSL
GGVLLFPIDEKESRNKGQDLLALIVAQHRDRSNVLSGIKLAALEEGLKKIFLAARKKKAS
VHLPRIGHATKGFNWYGTERLIRKHLAARGIPTYIYYFPRSKASILHSQASSSSSSRQLV
P
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcggaagccgggacctccgcgggcaacatgccccgcttcctgctggccctt
cagagccagagccgaactgaggcggagcgggcgcgggtgcaggaacaggacctccggcgg
tggggcctgacagggattcatctacgcccttatcagctggagggagtcaactggctggcc
cagtgtttccattatcagaatggctgcatcctgggagatgagatgggcctgggtaagacc
tgccagactattgctgtcttcatttacttggcagggagattaaatgatgaaggaccattt
ttgattctttgtcccttgtctgtcttgagcaactggaaagaagagatggagaggtgtgct
ccaggtctttgctgtgtgacatatgcaggtgacaaggaggagagagcccacctacagcaa
gacctaaagcaggagtcaggttttcatgtgctgctaactacctacgagatttgcttgaaa
gatgcatcatttctaaagtccttcccttggagtgttcttgtcgtggatgaagctcacagg
ttgaaaaaccaaaactccttgctgcataaatcactttcagagttctcagttgccttccgt
ctcctgctgaccggaacgcccatccagaacagcctccaagagctctactctctgctcagt
tttgtggagcctgatctcttttccaaggaggaggtggaagattttgtgcagcgttatgag
gatattgagaaagagtctgagtcagcaagtgaactctacaaactcttgcagccatttctg
ctgaggcgagtgaaagcggaggtagctgcagagcttcccaagaagacagaagtagtgata
tatcatggcatgtcagcactgcagaaaaaatactacaaggctattttgatgaaggaccta
gatgcatttgaaaatgagatggcaaagaaagttaaacttcagaatgtcttgtcccaactt
cgaaagtgtgtggatcacccatatttgtttgatggtgtggaaccagagccttttgaaatt
ggagaccacctcattgaggccagtgggaaacttcacctgctggacaagctgctggcgttc
ctgtattccaagggccatcgagttttacttttctcccaaatgacccagatgttggatatt
ctccaagactacatggattatagaggctacagctatgagcgtgtggatggttccgtgaga
ggggaagagagacacctggccattaagaactttggacagcagcccatctttatttttctc
ctgagcaccagggcaggtggcgttggcatgaacttaacagcagcagatactgtgattttt
gttgacagcgatttcaatcctcagaatgacttgcaagcagctgccagagctcaccgaatt
ggccagaacaagtctgttaaagttattcggctgatcggccgagacactgtggaagaaata
atctgtcggaaagcagcctccaagctgaagctcaccaacacgatcatagaagggggccgt
ttcaccctgggagcccagagacctgccgcagaggctgacctccagctgagtgagatactc
aaattcggtttggataaactgctatcctctgaggggagtaccatggacgaaatagacctg
gagtctatcctgggagaaacaaaagacggccagtggatctctgatgccctgccgagcaca
gaagaaggaagcagggagcaagaggaaggaaaaaaccatatgtacttatttgaaggtaaa
gattattctaaggagcctagtaaagaagacagaaaatcatttgagcaactggtgaatctt
cagaaaacccttttggagaaaactggtcaagagggccggttactccgaaataaaggcagt
gttctcatccccggccttgtggagggatccacccaaaggaagcggattctgagcccagaa
gaactggaggacagacggaagaaaaggcaagaagcagcagccaaaagaaagagactaata
gaggagaagaagaggaaaaaggaagaagccgaacataagaaaaagatggcctggtgggag
tccaacggttaccagtccttctgcctgccttccgaggacagcgagccagaggacctagag
gacgaggcagaagagagctctgctccactggattatgcagacccagactcgacctccatc
aagtatgtgagcggtgatgtcacccacccacaggccggggtggaggatgctgtcatcgtg
cactgtgtagatgattctggccactggggcagaggtggtttattcacagctctagaagca
agatctgcagagccaagaaaaatatatgagctggctgggaaaatgaaagatttgagtttg
ggaggtgtccttttatttcctattgatgagaaagagtcaagaaacaaaggacaagatttg
ttggccttgattgtggctcagcaccgcgatcgctccaatgtcctgtctggcattaagttg
gcagccctagaagagggcctgaagaagatattcttagcagcaaggaagaagaaggcaagt
gtccatcttccacgcattggacacgccacgaaaggttttaactggtatggtactgagcga
cttattcggaaacacttggccgcaagaggcatcccaacttacatatattactttcctcga
agcaaggcttccatccttcattcacaggcctcctcatcttcctcctcaagacagctggtg
ccttaa
DBGET
integrated database retrieval system
