Sus scrofa (pig): 100154215
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Entry
100154215 CDS
T01009
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X2
KO
K24223
cilia- and flagella-associated protein 43
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100154215 (CFAP43)
Cilium and associated proteins [BR:
ssc03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
100154215 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
CFAP43_N
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
100154215
NCBI-ProteinID:
XP_013839162
LinkDB
All DBs
Position
14:complement(115073529..115201965)
Genome browser
AA seq
1668 aa
AA seq
DB search
MAQGRERDESHSVAIGASLSVRWVQGFPKQNIHFVNDSTFCYPCGNFIIFINIETKKRTV
LQCINGIVGVMATNIPYEVVAFSDRRLRPLIYIYNFPGLTRRTKLKGNVLLDYTLLSFSY
CGTYLASYSSLPEFELALWNWELGVILCKKSQPGVDVSQMTFNPMNWCQLCLSSPSAVTV
WTIERCNQEHYLKAKSVKLPMEDGSFFNETDVIFPQSLPKDLIYGPVLPVSAIAGLVGEE
AETFRPKDDLYTLLHPTMHCWTPTSDLYIGCEEGHLLMINGENLKATVLSKMEDGTPNIG
RSHISPVTMVYQKGGVLASGIDGFVYSFLIKDTNYKVEDFLEIEEPVEHLIFSPSYKMLL
IQTDKGSVYIYTFGEEPTFEKILEACDGKFQATDFITPRSEYCMTLTASGEVCIWDIEDG
LCASRIYLKIPATVLACSPSSLSAAVGTKDGFVHFLDVRNVESPQAVHKAFLSESPVQHL
LYDQRGMYLLVGTSEGYIFVINAKPSSLFQILGFIEIGKGILQISTVSLLEKDIVKVMVL
YPLPDTGRSRLEIFTLPKIIPQVSASFADERGRLRDELIHKFVYEIEHTLSSAVLNFQSN
RIYGFCNQVPYICSYLLPEKEHGGVCILKPYQKVQSKQYGSGMLSLSPHGLWLITIAKCG
ILCVRDIHTLEVFARCRSHSHQGHGIQSVRISMDGQNILVNGRNDSTLVNLRWRRFGGHL
ANEILEYNQQLLTFLTNIMDEENDYLSITQRDSLVLESASEHTIHENRRSSTDSSQEELV
QVGNTEAIPWIQQKSQEAIKKEVKLFSNKRKEIKRKIKALAKTVLDMMEENEAVDNIAKL
EQQEFGLDLEELERLHHKSEEEVAKIRKDVEMQNLAKRYLAELIKEECWNSMAVKGRALK
CFHIPYVVENFPMKERTDEELKELKRVVQQKKIEAECLKLRKEIVEVQSAITMVKKHHEE
EDEEEEEDGTTKDTNLPNYLLGSLSTDFRVHTSLLSSQLELHSREEKINQIILLKDIIYK
VKTTFNSEFDAAYKQKEFEIARVKEKNVRIQEIILDLELEESVWQPEFEDCEKPERTLVV
KSSEITAHKHINPWQKSKTELLVAHEMEQSLLTRGSDARRRALMDMMGGVLEVKKEDILR
MVIPQPAFMAKPDALWSEEERKQFKEYEKKVKDLNEERDKYRKSLEAEMKKLQNSIQENT
QNFDEHLKKLFERRVKAEMVVNQEELKINNLVFSLLLDEEISSRETFLNNYLTRKQEEKS
QTAEVVRKSREDLDVYKEHYDNLLAEDKVLDRSFKKEFSEIPSHQVDILYKLFKRRPRIH
RQKVHADTTSLVPFGERPGSGKLNKDAFAQLMKAMDDLDNINNMPEGLDPSVWEHFCVTR
RAKVENEQKVKQKAAGLMEMVAFLRRRTEDDERVQQEIEKVLHELVLLQEDKVKFQLNLT
IQILLKQGQVELENFQFLLEYPDAILINKNIIEDLNSVIRTQGQKKVASMMESKNVHKGI
FQIEWEHKKMEMEMEDLNQKAWDIQMLFFSRDRQKFLNEPNYETLIAIQIGIMEQTIAVL
DKTHKKNVENCKKLLKKLGRCSSQKDVANYTLSCSLREELVAVSERKDICNAVGSKLTCE
KIAKERYENMMQQQKLTKISKEQAEQISILQAEVERLRMKTFPALVQM
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaggccgggagcgagacgaatcccacagcgttgccatcggcgcgtcgctgtcc
gtgagatgggtgcaaggattccctaagcagaatattcattttgtcaacgatagcaccttt
tgctacccttgtgggaatttcataatatttattaacattgaaaccaagaaaaggactgta
ctgcagtgtataaatggaattgtgggtgtcatggcaactaacattccttatgaagttgtg
gctttctctgaccgtcggctaagacccctcatctacatatacaactttcctggattgacc
agaaggaccaaattaaaaggcaatgttcttctggattacactttactttccttcagttac
tgtggcacctatctggcaagttactcctccctcccagaatttgaactggccctctggaac
tgggaattaggtgtcattttgtgcaagaagtcacaacctggtgtagatgtaagccagatg
acttttaaccccatgaactggtgccagctgtgcttgtcaagtccaagtgcagtgactgtt
tggaccattgaaagatgtaaccaagaacattatctcaaagcaaagtcagtaaaactgcct
atggaagatgggtcattttttaatgaaacagatgtaattttcccccaatcgttgcccaag
gatcttatctatggacctgtgctccctgtgtcagccattgctgggctagtgggtgaagag
gcagaaactttcaggcctaaagatgatctatatactttgcttcaccctactatgcactgc
tggactccaacaagtgacctatacattggctgtgaagagggtcatcttcttatgataaat
ggagaaaacttgaaggcaaccgtgcttagtaaaatggaagacggaacaccaaacattgga
aggagtcatataagtccggtcaccatggtgtatcagaagggaggcgtgcttgcttctgga
attgatggctttgtatattcttttcttattaaagatacaaattacaaagtagaggatttt
cttgagattgaagagcctgtggaacatttgatattttctcccagttacaaaatgctgcta
attcagacagacaagggatctgtttatatttatacttttggtgaagagccaacctttgaa
aaaatcctggaagcttgtgatgggaaatttcaggcaacagattttatcacaccaagaagt
gaatactgcatgaccctcacagcttcaggggaagtttgtatttgggatatagaagatggt
ttgtgtgccagcaggatttatctgaaaatcccagcaacagttctggcttgctctccctcc
tccctctctgcggccgtggggaccaaggatggttttgtccacttccttgatgtccggaat
gtggaatcccctcaggcagttcacaaggcctttctctctgaatctccagtgcagcacctc
ctgtatgaccagagaggaatgtatctattagttggaacatcagaaggatatatctttgtt
atcaatgccaaaccctcaagcttatttcagattcttggattcatagagatcggcaaaggt
attttgcaaatatccacagtgtctcttttggaaaaagacatagtgaaagtgatggtcctt
tacccacttccagatacaggaagaagcagactggaaatatttactctgcctaaaataata
ccacaagtttctgcaagctttgctgatgaacgagggaggctgagagatgaattaattcat
aagtttgtgtatgagatagagcacactctgtcctctgcagtcttgaattttcaaagtaac
cgaatatatggcttctgtaatcaagtgccatacatctgcagctatcttcttcctgaaaaa
gaacatggtggtgtttgcattcttaagccataccaaaaagtacaaagcaaacaatacgga
tctggaatgctctccttgtctccacatggattgtggctcataacaatagctaaatgtgga
attctgtgtgtccgggatattcataccttggaagtatttgctcggtgtcggagtcattct
caccaggggcacgggattcagtcagtgagaatttcaatggatggacaaaacattctggtg
aatgggagaaacgacagcacgcttgttaacctgagatggaggcggtttggaggacactta
gccaatgaaattcttgaatataatcagcaacttttaactttcctaacaaacatcatggat
gaggagaatgattatttaagtataacacaaagagattccttggttttggaatcagcatct
gaacacacaatacatgagaataggcggtcaagcactgactcatcgcaagaggaattagtc
caagttggtaatacagaggcaattccctggatacaacagaagagccaagaggccatcaaa
aaggaggttaaactgttttccaacaaaaggaaagagataaaaagaaaaatcaaagcgctt
gctaaaactgttctggacatgatggaagaaaatgaagcagtagacaatatcgcaaaatta
gagcaacaagaatttggcctggatcttgaagagctggaaaggctccatcataaaagtgag
gaagaagtggcaaagataagaaaggatgttgagatgcaaaacctagccaagagatatttg
gctgaacttatcaaagaagaatgctggaattcgatggctgtgaaaggccgagctcttaag
tgctttcacatcccctatgtggttgagaacttcccaatgaaagaacgtacagatgaagaa
ttgaaagaattgaaaagagttgtgcagcaaaagaagattgaagcagagtgtcttaaactt
cggaaggaaattgtagaggttcagtctgcaattactatggttaaaaagcatcatgaagag
gaggatgaagaagaggaagaagatgggacaacaaaagataccaacttgcccaattacctg
cttggcagtctgagtactgattttagggtgcatacctctttgttgtcaagccaactagaa
cttcattccagagaggagaaaatcaaccaaattatattactgaaagatattatttacaag
gtgaaaactactttcaacagtgagtttgatgctgcatataaacaaaaagagtttgaaatt
gcacgtgtgaaggaaaaaaatgtaagaattcaggaaattattttagatctggagttggaa
gaatcagtctggcaaccagaatttgaggactgtgagaagccagagagaacccttgttgtg
aaaagtagtgagattactgctcataaacatattaatccatggcaaaaatccaaaacagaa
ttgcttgtggcccatgaaatggagcagtcgcttctaacgaggggctccgacgcaagacgc
cgagccctcatggacatgatgggaggagttctggaagtcaagaaggaagacattttgaga
atggtgattcctcaacctgctttcatggcaaaacctgacgctttgtggtctgaagaggaa
aggaaacaattcaaagaatatgagaaaaaagtcaaggatttaaatgaagaaagagataag
tatagaaagtcattagaagcagaaatgaagaaacttcaaaactctattcaagaaaacaca
cagaattttgatgaacatttgaaaaaactcttcgaaaggagagtgaaagcagagatggtt
gtcaaccaggaggaattgaagataaacaaccttgttttttctttactgttggatgaagaa
ataagctccagagaaacattcttgaacaactaccttacacggaagcaggaggagaaaagc
cagacagcagaagtcgtccggaaatcaagagaagaccttgatgtgtacaaggaacactat
gacaacttactggcagaagacaaagttctggatcgtagctttaaaaaggagttttctgaa
attcccagtcatcaggtggatatactatacaaactgtttaaacgccgaccaaggattcac
agacagaaagtgcacgcagatacaaccagtcttgtgccttttggagaacgaccaggatct
gggaaattgaataaggatgcctttgcccagctaatgaaagccatggatgacttggacaat
attaataacatgccagaaggcttggacccctcggtctgggagcatttctgcgtgaccaga
cgagcaaaagtggaaaatgaacagaaagtaaagcagaaagcagctggcttaatggaaatg
gtggctttcctccggaggagaacagaagatgatgagagggtgcaacaggaaattgaaaaa
gtgctccatgagctcgtcctactacaggaagacaaagtgaaattccagttgaatttgaca
atccagatcctccttaaacaaggacaagtagagctggagaatttccagttcctgctggag
tatcctgatgcaatcctcatcaacaagaacataattgaagacttgaattctgtgattcgg
actcaaggacaaaagaaagttgctagcatgatggaaagtaaaaatgttcataaaggaata
tttcagattgagtgggaacataagaaaatggagatggaaatggaagatctaaatcagaag
gcttgggatattcagatgctgtttttttcaagagatcgtcaaaagttcctaaatgaacca
aactatgagactctgattgccattcaaattggaataatggagcaaaccattgctgtttta
gataagacccacaaaaagaatgtggaaaactgcaaaaaactacttaaaaaactgggaagg
tgcagcagtcaaaaagatgtagcaaattatactctaagctgcagcttacgagaagagttg
gtggctgtctcggagagaaaagacatctgtaatgcagtggggtctaaactgacttgtgaa
aagattgcaaaagaacgatatgaaaacatgatgcaacaacaaaagttaacaaaaatttca
aaagaacaagcagagcagatttcaatactacaggctgaagttgaaagattaaggatgaaa
acatttcctgctcttgttcaaatgtaa
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integrated database retrieval system
