Sus scrofa (pig): 100154470
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Entry
100154470 CDS
T01009
Symbol
LRRC49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X2
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100154470 (LRRC49)
04812 Cytoskeleton proteins [BR:
ssc04812
]
100154470 (LRRC49)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
100154470 (LRRC49)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
100154470 (LRRC49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
TAFII28
FTH
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100154470
NCBI-ProteinID:
XP_001928516
Ensembl:
ENSSSCG00000004976
UniProt:
A0A480K3F4
A0A4X1SX69
LinkDB
All DBs
Position
1:168553361..168711739
Genome browser
AA seq
685 aa
AA seq
DB search
MIPGKYRSVSGRAASNVNCGLHLVIQTSSLPEKNKVEFRLNKETSSFPGRLLQHDLERNY
SSRQGDHINLVSSSMPSFPILQRSSEEKILYSDRLTLERQKLTVCPIIDGEEHLRLLNFQ
HNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNLENLKSL
DVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDV
DNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQESWYKHTILQNMMQLRQ
LDMKRITEEERRMASVVAKKEEEKKRESHKQSLLKEKKRLTINNVARNWDLQQNRITNIA
ANQERKDSDSQDNSQNDGGTISAFPEETGSLDSGLTSALQGLSVTDTHLVEVDGDTLSLY
GSGALECLDRNWSVQTAGMVTTVSFTFIEFDEIVQVLPKLKIKFPNSLHLKFKETNLIML
QQFNALAQLRRVDQLTVDPQGNPVVSFTLWKYYVLFRLSHFSMQKINGTEVTQNDMIMAE
RLFGILAHVASSELPQYRLISILGDARKKQFRYLLETKGKKPGIASEENNDSKRLVGENT
NRATLNYTTRDFYNEKLEEIKEKKKFCKMYIEDLVKEATEINMKNEALQKLWPQMFIELV
RDAVIEIRNKNSYMKLCLQQITDQK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgattcccggaaaataccgctctgtttctggccgagctgcgagcaacgtgaattgtggg
cttcatctggttattcagacatcatcgcttcctgaaaaaaacaaagttgaattcaggcta
aataaagaaacatcatcattccctggtcgactcttacaacatgatcttgagagaaactac
tcaagtaggcaaggtgaccatattaatttggtgagctcctcaatgccatcatttcccatt
ctccaacggtcttctgaagagaaaattctttattcagacaggttgactctagaaaggcaa
aagctgactgtatgtcctatcatcgatggggaagaacaccttcgtttgttgaacttccaa
cacaattttataactcggatccaaaatatttctaatctacagaggctaatattcttggat
ttatatgataaccagattgaagaaattagtggcctttctactctgagatccctccgagtc
cttctattgggaaaaaacagaatcaagaaaatttcaaatctggagaatctaaaaagctta
gatgtcttagaccttcatggaaatcagattaccaaaattgaaaatgtcaatcatttgtgt
gatttgagagttttaaatcttgccaggaaccttttaagtcacgttgacaatcttaatggg
ctggattcactgactgaacttaacctgcgacacaatcaaatcacttttgtgagagatgtg
gataatttgccctgcctccaacgtctgtttctcagcttcaacaatatatctacttttgag
agtgtttgctgccttgctgactctacttctctctcagacatcacttttgatggcaatcca
atagctcaagagtcatggtacaagcacactatccttcagaatatgatgcagctacgccag
ctagatatgaagaggatcacggaagaagaaaggcgtatggcatcggttgtagccaaaaaa
gaggaagagaagaagcgggaaagtcataagcagtctttgcttaaggagaagaaaaggttg
actattaacaacgtagctcgaaactgggacttgcaacaaaatcgaataaccaatattgct
gcaaatcaagagagaaaagattctgactctcaggacaactctcagaatgatggaggcacc
atctctgcatttccagaggaaacagggtctttggactcaggactcaccagtgctttacaa
ggtctgtctgtcacagacacacatcttgttgaagtggatggggacacactttccttgtat
ggctcaggagcactggaatgtctggatcggaattggagcgtgcaaacagcaggaatggtg
acaacagtgtccttcactttcatagaatttgatgaaattgtccaagtgcttcccaaattg
aagattaagtttcctaattctctgcaccttaaattcaaggaaacaaatcttataatgctg
cagcagtttaatgcactagcacaactccgtcgtgttgaccagttgacagttgatcctcaa
ggaaatccagttgtcagttttacactctggaaatattatgtcctatttaggctgagtcat
tttagcatgcagaaaataaatggaacagaggtaacacaaaatgatatgataatggctgaa
aggctctttggaatcctagcacatgtagcatcttctgagttaccccagtaccgtctgatt
tcaattctgggtgatgccaggaagaagcaattccggtatcttttagaaaccaaagggaaa
aagcctggtattgccagtgaagaaaataatgatagcaagagacttgtaggagaaaataca
aatcgtgctacgctaaattataccacaagagacttttataatgaaaagctagaggaaata
aaagaaaaaaagaaattctgcaagatgtatatcgaggaccttgtgaaggaagctacagaa
atcaacatgaaaaatgaggctttgcagaagctttggcctcagatgttcattgagcttgtt
agagatgcagtcatagaaattcgcaataaaaattcctatatgaagctttgcctacagcag
ataactgaccaaaaatag
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