Sus scrofa (pig): 100154471
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Entry
100154471 CDS
T01009
Symbol
NTRK1
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04010
MAPK signaling pathway
ssc04014
Ras signaling pathway
ssc04020
Calcium signaling pathway
ssc04151
PI3K-Akt signaling pathway
ssc04210
Apoptosis
ssc04722
Neurotrophin signaling pathway
ssc04750
Inflammatory mediator regulation of TRP channels
ssc05200
Pathways in cancer
ssc05202
Transcriptional misregulation in cancer
ssc05216
Thyroid cancer
ssc05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100154471 (NTRK1)
04014 Ras signaling pathway
100154471 (NTRK1)
04020 Calcium signaling pathway
100154471 (NTRK1)
04151 PI3K-Akt signaling pathway
100154471 (NTRK1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100154471 (NTRK1)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
100154471 (NTRK1)
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100154471 (NTRK1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100154471 (NTRK1)
05202 Transcriptional misregulation in cancer
100154471 (NTRK1)
05230 Central carbon metabolism in cancer
100154471 (NTRK1)
09162 Cancer: specific types
05216 Thyroid cancer
100154471 (NTRK1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssc01001
]
100154471 (NTRK1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100154471 (NTRK1)
Protein kinases [BR:
ssc01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
100154471 (NTRK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRRCT_2
I-set
LRR_8
Ig_3
TrkA_TMD
LRR_NXF1-5
ig
LRR_4
Motif
Other DBs
NCBI-GeneID:
100154471
NCBI-ProteinID:
XP_001929560
Ensembl:
ENSSSCG00000006464
UniProt:
A0A4X1VSL3
F1RHK6
LinkDB
All DBs
Position
4:complement(93219509..93237944)
Genome browser
AA seq
795 aa
AA seq
DB search
MPRDGQRGQLGGHGRAKGLGSLLAWLMLASAGAASCPEVCCPHGPSGLRCTKVAALDIIR
HLPGAENLTELYIENQQHLQHLTLSDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSHL
NLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALFWLQRWEQEGRAGVREQKLQCPGQ
GPLALMPNASCGEPELKIQMPNGSVDVGDDVLLQCQVEGQGLEQAGWILMDLEESATVMQ
SGSLPSLGLTLAHVTSDLNRKNVTCWAENHVGRAEISVQVNVSFPPIVSLHTAVEQHHWC
IPFSVDGQPAPSLRWFFNGSVLNETSFIFTEFMEPAANETMRHGCLRLNQPTHVNNGNYT
LLATNPLGQNASSIMAAFMDNPFEFNPEDPIPVSFSPVDTNSTSGNPVEKDETPFGVSMA
VGLAVFACLFLSTMFLVLNKCGRRNKFGINRPAVLAPEDGLAMSLHFMTLGGSSLSPTES
KGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLV
AVKALKEVSESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL
RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG
LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF
TYGKQPWYQLSNTEAIECITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAQL
QALAQAPPVYLDVLG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagacggacagcgcgggcagctcggcggacatggccgggctaaggggctgggc
agcctactggcctggctgatgctggcatctgcgggcgccgcatcctgtcccgaagtctgc
tgcccccacggcccttcggggctgcgctgcacgaaggttgcggccctggatatcatccgc
cacctgccgggcgccgagaatctgacggagctctacatcgagaaccagcagcacctgcag
catctgacgctcagtgacctgagaggcctgggggagctgaggaacctcaccattgtgaag
agtggtctccgtttcgtggcgccagatgctttccatttcactcctcggctcagtcatctg
aatctctccttcaatgctctggagtctctctcctggaaaaccgtccagggcctctcctta
caggaactagtcctgtcgggaaaccctctgcactgttcctgtgccctgttctggctgcag
cgctgggagcaggaggggcgggccggagtgcgggaacagaagctgcagtgtccgggccag
ggacccctggccctcatgcccaatgccagctgtggtgagcctgagctgaagatccagatg
cccaatggctctgtggatgtgggggacgacgtgttgctacagtgccaggtggaggggcag
ggcctggagcaggccggctggatcctcatggacctggaggaatcagccacagtgatgcaa
tctgggagtctgccgtccttgggactgaccctggcccatgtcaccagtgacctcaatagg
aagaacgtgacgtgctgggccgagaatcatgtgggccgggctgaaatctccgtccaggtc
aacgtctccttccctcccatcgtgagcctgcacacagcagtggagcagcaccactggtgc
attcccttctcggtggacgggcagcccgcaccctccctgcgctggttcttcaatggctcc
gtgctcaatgagaccagcttcatcttcactgagttcatggagccggcagccaatgagact
atgcggcacggctgcctgcgcctcaaccagcccacccacgtcaacaacggcaactacacg
ctgctggctaccaaccccttgggccagaatgcctcctccatcatggccgccttcatggac
aacccttttgagttcaaccctgaggaccccatccctgtctccttctcgccagtcgacacc
aacagcacatctggaaacccagtggagaaggatgaaacaccttttggggtctcgatggcc
gtgggcctggccgtttttgcctgcctcttcctttctaccatgttccttgtgctcaacaaa
tgtggacggaggaacaagtttgggatcaaccgccccgctgtgctggctccagaggatgga
ctggccatgtccctgcatttcatgacactgggtggcagctccttgtcccccaccgagagc
aaaggctctgggctccaaggccacatcattgagaacccacagtacttcagtgatgcctgt
gttcatcacatcaagcgccgggatatcgtgctcaagtgggagctgggtgagggcgccttt
gggaaggtcttccttgccgagtgccacaacctgctgcccgagcaggacaagatgctagtg
gccgtcaaggcgctgaaggaagtgtccgagagcgccaggcaggacttccagcgggaggcc
gagctgctcaccatgctgcagcaccagcacatcgtgcgcttctttggcgtctgcaccgag
ggccgtccgctgctcatggtctttgagtacatgcggcatggggaccttaaccgcttcctt
cggtcccacgggcctgatgccaagctgttggccggcggggaagacgtggctccagggccc
ctgggcctggggcagctgctggctgtggctagccaggtcgctgcggggatggtgtaccta
gcgggtctgcacttcgtgcatcgcgacctggccacgcgcaactgtttggtgggtcagggc
ctcgtggtcaagatcggcgatttcggcatgagccgggatatctacagcaccgactattac
cgcgtgggaggccgaaccatgctgcccatccgctggatgccgcccgagagcatcctctac
cgcaagttcaccaccgagagcgacgtgtggagcttcggcgtggtgctctgggagatcttc
acctatggcaagcaaccctggtaccagctctccaacaccgaggcgatcgagtgcatcacg
cagggacgtgagctggagcgaccgcgtgcctgtccgccagaggtctatgccattatgcgg
ggctgctggcagcgggagccccaacaacgccacagcatcaaggatgtacatgcccagctg
caagccctggcccaggcgcctcctgtctacctggatgtcctgggctag
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