Sus scrofa (pig): 100154556
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Entry
100154556 CDS
T01009
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100154556 (WDR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100154556 (WDR3)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100154556 (WDR3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Utp12
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
DSE1_N
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_Aladin
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_WDR41
ASA1
Beta-prop_DCAF4
Beta-prop_SPT8
WDR54
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_HPS5
WD40_like
Beta-prop_RIG_1st
PAC11
B-prop_COPA_B_2nd
Utp21
CFAP43_N
DUF6832
Motif
Other DBs
NCBI-GeneID:
100154556
NCBI-ProteinID:
XP_020945629
Ensembl:
ENSSSCG00000006727
UniProt:
F1SAY9
A0A8D1EXV1
LinkDB
All DBs
Position
4:complement(102841459..102878636)
Genome browser
AA seq
943 aa
AA seq
DB search
MGLTKQYLRYVASAVFGLIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILI
LQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGG
RLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDT
QHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDIAYLEEIEDPEEPEPKKIKGS
SPRMQDTDETEDGTLEMDEAPEDRILTCRKAGSIMREGRDRVVNLAVDRTGRILACHGTD
SVLEVFRVLSIEEIQKKMDKKLKKARKKAKLNSGKEEEEDLEVSVEMTLQDEIQRVTNIK
TSAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLNPSVPASQPVRTSRITIGGHRSDVRT
LSFSSDNIAVLSGAAESIKIWNRSTLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQL
YDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSV
KQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDIS
YDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQW
DADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWERTREPLILEEEREMQRE
AEYEESVAKEDQPAVPGETQGDNYFTGKKTIETIKAAERIMEAIELYREETAKMREHKAI
CKAAGKEVPLPINPILMAYGNISPSAYVLEIFKGIKSSELEESLLVLPFSYVPDILKLFN
EFIQLGSDIELLCRCLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVSQVRDVIGFNMA
GLDFLKRECEARSEVMFFADATSHLEEKKRKRKKREKLILTFT
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggggctcaccaagcagtacctacgctatgttgccagtgcagtctttggccttattggc
agccaaaaaggtaatattgtctttgtgacacttcgtggtgaaaaaggacgctatgtggca
gtaccagcctgtgaacatgttttcatctgggacctacggaaaggagagaagatcctcatc
cttcagggacttaaacatgaagtcacttgcttatgcccctccccagatgggctgcacttg
gctgttggttatgaggatgggtctatcagaatcttcagtctcctgagtggagaaggaaat
gtgaccttcaatggacacaaagcagccgtcacttccttgaagtatgatcagctgggaggc
aggctggcgtctgggtccaaggacacagatattatcgtgtgggatgtgatcaatgaaagc
ggcctctaccgtctaaagggacacaaggacgccatcacacaagcattgtttctacgagaa
aagaatctgctagttagtagtgggaaagataccatggtgaaatggtgggaccttgacacc
cagcactgcttcaaaacagtggttggccaccgaactgaggtgtggggcttggttctggtg
tccgaagaaaagcggctcatcactggggcctctgacagtgaactgagggcctgggacata
gcttatctggaagagattgaagacccagaagaaccagagcccaagaaaatcaaagggtct
tctcccagaatgcaggacacagatgaaacagaggatggtaccctggagatggacgaagct
cctgaggatcgcatcctcacatgcagaaaagctggctccataatgcgggaaggaagggac
agggttgtgaaccttgcagtcgacaggacaggcaggattcttgcttgccacggaactgat
tccgtgctagaagtatttcgtgtcctttccatagaggaaattcagaagaaaatggacaag
aagctgaagaaagctcgaaagaaagcaaaattaaattctggcaaagaggaggaggaagac
cttgaggtcagtgttgaaatgactctgcaggatgaaatccaacgggtgactaacatcaaa
acttccgccaaaatcaaatccttcgacttgattcattcgcctcaaggagagttaaaggct
gtcttcctgctgcagaacaacttggtggaattgtactccctgaacccctccgtgccagca
tctcagcccgtcaggacaagcagaattaccattgggggtcaccgcagtgatgtgcggact
ttgtcattcagctcagacaatatcgctgtcctttcaggagccgctgagtccattaagata
tggaacagatccacgctacagtgtattcgcacgatgacctgcgagtatgcactttgctcc
ttctttgtacctggtgatcggcaggtggtcataggaacaaagacaggaaagctgcagctt
tatgacttggcctcaggaaatctgctggagacagtagatgcacatgatggagctttgtgg
tccttgtctctctctcccgatcagcgtggctttgtgacaggcggtgcagataaatctgtc
aagttctgggattttgagttggtaaaagatgaaaacagtacccagaagaggctttctgtg
aagcaaactcgaaccctgcaactagatgaagaagttctgtgtgtcagttactctcccaat
caaaagctgttggctgtgtctttgctggactgcactgtgaaaattttctatgttgatact
ttaaagttttttctctcactgtatggacacaaactgcctgttatatgcatggatatctct
tacgatggagcactgatagcaaccggctctgccgacaggaacgtgaagatctggggcttg
gactttggggactgccacaagtctctctttgcacatgacgacagtgtgatgtacctcaag
ttcgtacccaagtctcacctcttcttcactgctgggaaagaccgtaagattaagcagtgg
gatgcagacaaatttgaacacgtccagactttggaggggcatcaccaggaaatatggtgt
ctggccataagccccagtggagactacgtggtgtcatcatcccatgacaaatctctgaga
ctctgggagagaacaagggagcctcttatcctcgaggaagaaagggagatgcaaagggaa
gcagaatatgaggagagtgttgccaaagaagaccaacccgcagttccgggagagactcaa
ggtgacaattactttactggaaagaagaccattgaaaccatcaaagcagctgagaggatc
atggaggccattgagctctatcgagaagaaactgcaaaaatgagagaacacaaagccatt
tgtaaagctgcagggaaagaggttcctcttcccatcaaccccatcctgatggcttacggc
aatatctctccttcagcttatgtgttggagatttttaaaggaatcaagtcaagcgagctg
gaggagtctctgcttgtgctgccattctcttacgtcccagacattcttaagctctttaat
gaatttatccagctgggctccgatattgaacttctgtgtaggtgcctcttctttctcctc
aggattcactttggccagatcacaagcaatcaaatgcttgtgccagtgattgaaaaatta
aaggaaacaactatttcaaaagtcagccaagtccgggatgtcatcggcttcaacatggca
ggtcttgatttcctcaagagggaatgtgaggcaagaagcgaagttatgttttttgctgat
gctacgagccacttggaagaaaagaagaggaagaggaaaaagagggagaagctgatttta
acattcacttag
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integrated database retrieval system