KEGG   Sus scrofa (pig): 100154859
Entry
100154859         CDS       T01009                                 
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100154859 (VPS28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100154859 (VPS28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100154859 (VPS28)
Membrane trafficking [BR:ssc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    100154859 (VPS28)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100154859 (VPS28)
  Exosomal proteins of other body fluids (saliva and urine)
   100154859 (VPS28)
  Exosomal proteins of colorectal cancer cells
   100154859 (VPS28)
  Exosomal proteins of bladder cancer cells
   100154859 (VPS28)
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 100154859
NCBI-ProteinID: XP_001927493
Ensembl: ENSSSCG00000005904
Vega: OTTSUSG00000000705
UniProt: A0A8D0SK51 A0A4X1UQN2
LinkDB
Position
4:362902..368038
AA seq 221 aa
MFHGIPATPGMGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDC
VTPNEYTAACSRLLVQYKAAFRQVQGSEVSSIDEFCRKFRLDCPLAMERIKEDRPITIKD
DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTV
SQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHA
NT seq 666 nt   +upstreamnt  +downstreamnt
atgtttcacgggatcccagccactcctggcatgggagcccctggaaacaagccggagctg
tatgaggaggtgaagctgtacaagaatgcccgtgagcgggagaagtacgacaacatggcc
gagctgtttgcagtcgtgaagacgatgcaggccctggagaaggcgtacatcaaggactgc
gtcacccccaacgagtacactgcggcctgctcccggctcctggtccagtacaaagctgcc
ttccggcaggttcagggctcagaagtcagctccattgatgaattctgccgcaagttccgt
ctggactgcccgctcgccatggagaggatcaaggaggaccggcccatcaccatcaaggac
gacaagggcaacctcaaccgctgcatcgctgatgtcgtctcgctcttcatcaccgtgatg
gacaagctgcgcctggagatccgcgccatggacgagatccagccggacctgcgggagctg
atggagaccatgcatcgcatgagccacctgcctcccgacttcgagggccgccagacggtc
agccagtggctgcagaccctgagcggcatgtcggcctcggacgagctggacgactcccag
gtgcgccagatgctctttgacctggaatcggcctacaacgccttcaatcgcttcctgcac
gcctga

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