Sus scrofa (pig): 100155078
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Entry
100155078 CDS
T01009
Symbol
FMR1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100155078 (FMR1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100155078 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
100155078 (FMR1)
mRNA cycle factors
Stress granule specific factors
100155078 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
MlrA_C
Motif
Other DBs
NCBI-GeneID:
100155078
NCBI-ProteinID:
XP_001925767
Ensembl:
ENSSSCG00000012727
Vega:
OTTSUSG00000004916
UniProt:
A0A4X1SVB5
K7GSF4
LinkDB
All DBs
Position
X:120361232..120400282
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AA seq
632 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLDVPEDLRQMCAKESAHKDFKKAVGAFSVTYDPEGYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSSNSRVGPTPSEEKKHIDIKE
NSTHFSQPNSTKVQRVLVVSSVVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYH
LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRG
HGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERENFLRRGDGRRRGGGGRG
QGGRGRGGGFKGNDDHSRTDNRSRNPREAKGRTADGSLQIRVDCNNERSVHTKTLQNTSS
EGNRLRTGKDRNQKKEKPDSVDGQQPLVNGVP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaagtgcggggctccaatggcgctttctacaaggcgtttgta
aaggatgttcatgaagattcaataacagtggcatttgaaaacaactggcagccagagagg
cagattccattccatgatgtgagattcccaccacctgtaggttataataaagatataaat
gaaagcgacgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtgg
ttagctaaagtgaggatgataaagggtgagttttacgtgatagaatatgcagcatgtgac
gctacatacaatgaaattgtcacaattgaacgtttacgatcggttaatcccaacaaacct
gccacaaaagatactttccataaaatcaaactggatgtgcccgaagatttacgacaaatg
tgtgccaaagaatcggcacataaggactttaaaaaggcagttggtgccttttctgtaact
tatgatccagaaggttatcagctcgtcattttgtctatcaatgaagtgacctcgaagcga
gcacacatgttgattgacatgcactttcggagtctgcgcactaagctgtctctgatactg
agaaatgaagaagccagtaagcagctagagagttcaaggcaacttgcctcaaggtttcat
gaacagtttatcgtacgagaagatctgatgggtctagctattggtactcatggtgctaat
attcagcaagctaggaaggtacctggggtcactgctatcgatctcgatgaagatacctgc
acgtttcatatttatggagaggatcaggatgcagtgaaaaaggctcgaagctttcttgaa
tttgccgaagatgtcatacaagttccaaggaacttagtaggcaaagtaatagggaaaaat
ggaaaactgattcaggagattgtggacaaatcaggagtcgtgagggtgagaattgaggct
gaaaatgagaaaaatgttccgcaagaagaggaaattatgccaccaaattccctaccttcc
agtaactcacgggttggacctactccctcagaagaaaaaaaacatatagatataaaggaa
aacagcactcatttttctcaacctaacagcacaaaagtccagagggtgttagtggtttca
tcagttgtagcaggggaatcccagaaacctgaactcaaggcttggcagggtatggtaccg
tttgtttttgtgggaacaaaggacagcatcgctaatgccactgttcttttggattatcat
ctgaactatttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcag
ttgcgacagattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggc
tatgtgactgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaataggggg
cacggcagacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttct
gaaacagaatctgaccacagagacgaactcagtgattggtcattagctccaacagaggaa
gagagggagaacttcctgcgcagaggagacgggcgacggcgtggaggtggaggaagagga
cagggaggaagaggacgcggaggtggcttcaaaggaaacgacgatcactcccgaacagat
aatcgttcgcgtaatccaagggaggcgaaaggcagaacagcagatggatccctccagatc
agagttgactgcaataatgaaaggagtgtccacactaaaaccttacagaatacctccagc
gaaggtaatcggctgcgcacgggtaaagatcgtaaccagaagaaggaaaagccggacagc
gtggacggtcagcaaccacttgtgaacggagtaccctaa
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