Sus scrofa (pig): 100155274
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Entry
100155274 CDS
T01009
Symbol
PSMC1
Name
(RefSeq) 26S protease regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03050
Proteasome
ssc05010
Alzheimer disease
ssc05012
Parkinson disease
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05020
Prion disease
ssc05022
Pathways of neurodegeneration - multiple diseases
ssc05165
Human papillomavirus infection
ssc05169
Epstein-Barr virus infection
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100155274 (PSMC1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100155274 (PSMC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100155274 (PSMC1)
05165 Human papillomavirus infection
100155274 (PSMC1)
09164 Neurodegenerative disease
05010 Alzheimer disease
100155274 (PSMC1)
05012 Parkinson disease
100155274 (PSMC1)
05014 Amyotrophic lateral sclerosis
100155274 (PSMC1)
05016 Huntington disease
100155274 (PSMC1)
05017 Spinocerebellar ataxia
100155274 (PSMC1)
05020 Prion disease
100155274 (PSMC1)
05022 Pathways of neurodegeneration - multiple diseases
100155274 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssc03051
]
100155274 (PSMC1)
Proteasome [BR:
ssc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
100155274 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_14
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
AAA_24
Parvo_NS1
NB-ARC
PhoH
NACHT
ABC_tran
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
100155274
NCBI-ProteinID:
NP_001231080
Ensembl:
ENSSSCG00000002433
UniProt:
F2Z5J1
A0A4X1ST93
LinkDB
All DBs
Position
7:112027904..112041360
Genome browser
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggtggtcatggccctggaggtggcaagaaggatgacaaggat
aagaaaaagaaatacgaaccccctgtaccaactagagtggggaagaagaagaagaaaaca
aagggaccagatgctgccagcaaactgcccctggtgacacctcacactcagtgccggtta
aaattactgaagttagagagaattaaagactatcttctcatggaagaagaattcattaga
aatcaagaacaaatgaagcctttagaagaaaagcaagaggaggagagatcgaaggtggat
gatctgagggggaccccaatgtcagtgggaaccttggaggagatcattgatgacaatcat
gccatcgtgtccacgtctgtgggctcggaacactacgtcagcatcctttcatttgtagac
aaggatctgctggaaccgggctgctctgtcctgctcaaccataaggtgcatgccgtgata
ggggtgctcatggatgacacagatcccttggtcacagtgatgaaggtggagaaggccccc
caggagacctatgctgatattggggggctggacaaccagatccaggagatcaaggagtct
gtggagcttcctctcactcatcctgagtattatgaagagatgggtataaagcccccgaag
ggggtcattctctacggcccacccggcacaggtaaaaccttactagccaaagcagtagca
aaccaaacctcggccactttcttgagagtcgtcggctctgagcttattcagaagtacctc
ggtgacgggcccaaactcgttcgggaactgttccgagttgctgaagaacatgcaccgtcc
atcgtgtttattgatgaaatcgatgctattgggacgaaaaggtacgactcaaattctggg
ggtgagagagaaattcagcgaacaatgttggaactgctgaaccagttggatggatttgat
tcaaggggagacgtgaaagtcatcatggccacaaaccgaatagagactttggacccagca
cttatcagaccaggccgcatcgacaggaagatcgagtttcccctgcccgacgagaagacg
aagaagcgcatctttcagatccacacgagcaggatgacactggccgacgatgtcaccctg
gacgacttgatcatggccaaagatgacctctccggtgccgacatcaaggcaatctgtaca
gaagctggtctgatggccttgagagaacgtaggatgaaagtaacaaatgaagacttcaaa
aaatctaaagaaaatgttctttataaaaaacaagaaggcacccctgaggggctctatctg
tag
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integrated database retrieval system
