Sus scrofa (pig): 100155428
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Entry
100155428 CDS
T01009
Symbol
TAPBP
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04612
Antigen processing and presentation
ssc05163
Human cytomegalovirus infection
ssc05168
Herpes simplex virus 1 infection
ssc05169
Epstein-Barr virus infection
ssc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100155428 (TAPBP)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100155428 (TAPBP)
05168 Herpes simplex virus 1 infection
100155428 (TAPBP)
05163 Human cytomegalovirus infection
100155428 (TAPBP)
05169 Epstein-Barr virus infection
100155428 (TAPBP)
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Gene cluster
GFIT
Motif
Pfam:
C1-set
ig
Ig_3
Med5
Motif
Other DBs
NCBI-GeneID:
100155428
NCBI-ProteinID:
XP_005665941
Ensembl:
ENSSSCG00000001507
UniProt:
A0A8D1G9D0
A0A5G2R356
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Position
7:complement(29663491..29673453)
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AA seq
450 aa
AA seq
DB search
MKPLSLLLSVVALGLASTVSAGPAVIECWFVEDAGRGQLSKKPAALLLRQGPGSPPPRPD
LEPELYLKVHDPAGALLAAFRQYPRDAPAPRCEMSHYIPLPASPDWVSGLTPEQRCPRAL
DGKWLMVSMSSPVLSLSSFLQPQSEPQLEPALITMATAVLTVITHTPAPRIRLGQDALLD
LSFAYVPPTSKAAISLAPGPPPFGLEWRRQHLGKGHLLLAATPGLSGQVPAAREGAVAFA
AWDDDEPWGPWTGNGSFWLPAVQPFQEGTYLATVHLPYLQGQVAMDLAVQKSPKVSLTPA
PLVWAAPGEAPPELLCLVSHFYPSEGLEVEWELRGGPQGRFQKAEGQSWHSALSHHADGS
VSLSAHLQLPPVTTEQHGARYACRVHHPSLPALGRRSEITLQVAGLSGPSLEDGVGLFLS
AFLLLGLIKALGWAAAHLAASRDSTQKKTE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctctgtctctgctcctctctgtagtagctttgggcttggcgtccaccgtctcg
gcgggtcccgcggtgatcgagtgctggttcgtggaggatgcgggccggggccagctgtcc
aagaaacccgctgccctgctgctgcgccagggccccgggagcccacctcctcggccggac
ctcgagccagagctctacctcaaagtgcacgaccctgcgggagccctcctagccgccttc
aggcagtacccccgggacgcccccgcgccacgctgcgagatgagccactatatcccgctc
cccgcctcgcccgactgggtcagcggcttgactccggagcagaggtgcccgcgggccctg
gacgggaagtggctaatggtcagtatgtccagcccggtactcagcctttccagcttcctt
cagccgcagtctgagcctcagctggagcctgctctcatcaccatggcaacagctgtgctc
actgtcatcacccacacacccgcccctcgcatccgactgggacaagatgccctactggac
ttgagctttgcctatgtgccccccacctccaaggctgctatatctctagccccaggtccc
cctccctttgggctggagtggcgacgccagcacctgggcaaggggcacctcctcttggct
gcaactccagggctgagtgggcaggtgccagctgcccgagagggggcagtagcctttgct
gcttgggatgatgatgagccctgggggccatggaccggaaatggcagcttctggctgcct
gcagtgcagcccttccaggagggcacctatctggccactgtacacctgccatacctgcaa
gggcaggttgccatggatcttgctgtacagaagtcccccaaagtgtccctgacaccagcg
ccccttgtgtgggctgcccccggagaggctcctccagagttgctctgcctggtgtctcac
ttctacccctccgagggcctggaggtggagtgggagctccggggtggcccacagggtcgc
tttcagaaggccgaggggcagagttggcactctgccctgagccaccatgcagatggctct
gtcagcctgtccgcacacctgcagctgcccccagtcaccaccgaacagcatggggcccgc
tatgcctgcagagtccaccacccgagcctgcctgccttggggcgcaggtctgagatcacc
ctgcaggtggcaggtctctcggggccctctctcgaggacggcgtgggcctcttcctgtct
gcctttctcctccttgggctcatcaaggcactgggctgggctgctgcccatctggccgct
tccagggactcaacgcaaaagaaaactgagtga
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