Sus scrofa (pig): 100155465
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Entry
100155465 CDS
T01009
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100155465 (LINGO1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
100155465 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
100155465
NCBI-ProteinID:
XP_001929222
Ensembl:
ENSSSCG00000001872
UniProt:
F1SJ87
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All DBs
Position
7:complement(57684591..57890121)
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AA seq
620 aa
AA seq
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MQVSERMLAGGAKSVPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGISSADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgctggcggggggcgcgaagagcgtgcccagccccctcctg
gcctgctggcagcccatcctcctgctggtgctgggctctgtgctgtcaggctcagccacc
ggctgcccgccccgctgtgagtgctccgcccaggaccgtgccgtgctctgccaccgcaag
cgcttcgtggctgtgcccgagggtatccccactgagacccgcctgctagacctgggcaag
aaccgcatcaaaacactcaaccaggacgagtttgccagtttcccgcacttggaggagctg
gagctcaacgagaacatcgtgagcgccgtggagcccggcgccttcaacaacctcttcaac
ctccggacgctggggctccgcagcaaccgcctgaagctcatccctctgggcgtcttcacc
ggcctcagtaacctgaccaagctggacatcagtgagaacaagatcgttatcctgctggat
tacatgttccaggacctgtacaacctcaagtccctggaggtcggtgacaacgacctcgtc
tacatctcccaccgagccttcagcggcctcaacagcctggagcagctgacgctggagaaa
tgcaacctgacctccatccccaccgaggcgctttcccaccttcatggtctcattgtcctg
cggctccggcacctcaacatcaacgccatccgggactattccttcaagaggttgtaccgg
ctcaaggtcttggagatctcccactggccctacttggacaccatgactcccaactgtctc
tacggcctcaacttgacgtccctgtccatcacgcactgcaacctgaccgctgtgccctac
ctggccgtgcgccacctggtctatctccgcttcctcaacctctcctacaaccccatcagc
accatcgagggctccatgttgcatgagctgctaaggctgcaggagatccagctggtgggt
gggcagctggccgtggtggagccctacgccttccgtggcctcaactacctgcgagtgctc
aacgtctctggcaaccagctgaccacgctggaggagtcggccttccactcggtgggcaac
ctggagacgctcatcctggactccaacccgctggcctgcgactgccggctcctgtgggtg
ttccggcgccgctggcggctcaacttcaaccggcagcagcccacgtgtgccactccggag
ttcgtccagggcaaggagttcaaggacttccctgatgtgcttctgcccaactacttcacc
tgccgtcgtgcccgcatccgggaccgcaaggcccagcaggtgtttgtggacgagggccac
acggtgcagttcgtgtgccgggccgatggcgaccctccgcccgccatcctctggctgtcg
ccccgcaagcacctggtctcggccaagagcaacgggcggctcacggtcttccccgacggc
acgctggaggtgcgctatgcccaggtacaggacaacggcacgtacctgtgcatcgcggcc
aacgcgggcggcaacgactcgatgcccgcccacctgcatgtgcgcagctactcgcccgac
tggccccatcagcccaacaagaccttcgccttcatctccaaccagccgggcgagggagag
gccaacagcacccgcgccaccgtgcctttccccttcgacatcaagaccctcatcatcgcc
accaccatgggcttcatctctttcctgggcgtcgtcctcttctgtctggtgctgctgttt
ctctggagccggggcaagggcaacacgaagcacaacatcgagattgagtatgtgccccgc
aagtcggacgcaggcatcagctccgctgacgcacctcgcaagttcaacatgaagatgata
tga
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