KEGG   Sus scrofa (pig): 100155476
Entry
100155476         CDS       T01009                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100155476 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssc03021]
    100155476 (TAF5L)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100155476 (TAF5L)
Transcription machinery [BR:ssc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100155476 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     100155476 (TAF5L)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100155476 (TAF5L)
    STAGA complex
     100155476 (TAF5L)
    TFTC complex
     100155476 (TAF5L)
    SAGA complex
     100155476 (TAF5L)
    SLIK complex
     100155476 (TAF5L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 TFIID_NTD2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd RMC1_N Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR19_1st WD40_RFWD3 PROPPIN PEP5_VPS11_N WD40_like Beta-prop_IP5PC_F eIF2A WD_LRWD1 Ge1_WD40 vATP-synt_AC39 Nbas_N Beta-prop_ELP1_1st Mala_s_1-like
Other DBs
NCBI-GeneID: 100155476
NCBI-ProteinID: XP_005671039
Ensembl: ENSSSCG00000010187
UniProt: A0A8D1U9B5
LinkDB
Position
14:60254502..60286368
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSAEEMAANLAVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSAKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTVQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQ
SDNNAALCRVLTWHIHLDVQPAKRTDYQLYASGGSSRGEGSGLEPTDMPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPESKLLAAGFDNSCIKLWSLRSK
KLKPEPHRVDVSRIHLACDILEEEDDEDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTHCSAPTDGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgggtgcgtaccgagcagatccagatggccgtgtcctgctacctcaagcgccgg
cagtatggggatgcagacggcccgctgaagcaaggcctgcgactgtcacagagtgctgag
gagatggcggccaaccttgcagtccaatcagaatctggttgtgccaacatagtgtctgca
gccccttgccaggcagagccccagcaatatgaagtacagtttggaaggctgcggaatttt
cttactgactctgactcccagcacagccacgaagtgatgcctctcctctatcccctcttt
gtctacctccatctcaacctggtccagaacagtgcgaagagcacggtggaaagtttctac
agccgcttccacgggatgtttctgcagaacgccagccagaaggacgtcatcgagcagctg
cagaccacgcagaccgtccaggacatcctgtccaatttccggctacgggccttcctggac
aacaagtacgtggtccgtctccaggaggacagctacaactaccttctccgctacctccag
agtgacaacaacgccgccctgtgccgggtcctcacctggcacatccatctggacgtgcag
cccgccaagaggacagactaccagctctacgccagtggcggctcctcccggggcgagggc
agcggcctggagcccaccgacatgccggcccccatcctgcagaatgaggccgcgctagag
gtcctgcaggagagcattaagcgcgtcaaggatggcccaccctccctcaccaccatctgc
ttctatgccttctataacaccgagcagcttctgaacacagcggagatctccccagagagc
aagctgctggcggctggctttgacaactcctgtataaagctatggagtttgcgctccaag
aagctcaagccagagccccatcgggtagatgtgtcccgcatccacttggcttgtgatatc
ctggaggaggaggatgatgaggacgatgacgtgggcacggagatgaaggtcctgcgggga
cactgtgggccagtgtacagcacgcggttcctcgcggacagctcagggttgctctcctgc
tctgaagatatgtccatccgatactgggacctgggcagcttcaccaacactgtgctgtac
cagggccacgcctacccagtgtgggatgtggacattagcccatacagcctgtacttcgcc
agcggctcccacgaccgcacagccaggctgtggtccttcgatcggacgtacccactgcgg
atctacgccgggcacctggccgatgtggactgcgtcaagttccaccccaactcaaactac
ttagccacgggctccactgacaagaccgtccggctgtggagcgcgcagcaggggaactcg
gtgaggctcttcaccggccaccgaggccccgtgctctctctggccttctcccccaatgga
aagtacttggcgtcggcaggcgaggaccagcgtctgaagctgtgggacctggcatctggg
accctcttcaaagagctgcgaggccatacagacaacatcaccagcctcacctttagccct
gacagcagcttgatcgcgtcagcttccatggacaattcagtgcgtgtctgggacatccgg
aacacgcactgcagcgcgcccaccgatggctcctccagcgagctggtgggcgtctacacc
ggccagatgagcaacgtgctgagcgtgcagttcatggcctgcaacctcctgctggtgacc
ggaatcacacaagaaaatcaggaacattga

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