Sus scrofa (pig): 100155557
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Entry
100155557 CDS
T01009
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100155557 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100155557 (MYO5C)
04131 Membrane trafficking [BR:
ssc04131
]
100155557 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100155557 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100155557 (MYO5C)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100155557 (MYO5C)
mRNA cycle factors
P-body specific factors
100155557 (MYO5C)
Membrane trafficking [BR:
ssc04131
]
Others
Actin-binding proteins
Myosins
100155557 (MYO5C)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100155557 (MYO5C)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100155557 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100155557
NCBI-ProteinID:
XP_005659654
Ensembl:
ENSSSCG00000004621
UniProt:
A0A287ARB4
A0A8D0J3Q4
LinkDB
All DBs
Position
1:119407298..119536443
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYKIGDKVLQLLLEDGTELDYSVDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLASAEEFNYTRMGGSTVIEGVNDR
ADMIETQKTFSLLGFKEDFQMDVFKILAAILHLGNVEIIAVGNERSAVSEDDSHLKVFCE
LLGLESGKVAQWLCNRKIITTSETVVKPMTRPQATNARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFINKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCANFFQENPVLSSPF
GSAITVKSAKPVIKPNNKHFRSTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTKQELSFSDKKEVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCVVIQKHIRGWLQRKKFLRER
RAALIIQQYFRGQQTVRKAVTATALKEAWAAIIIQKHCRGYLVRNLYQLIRVATITIQAY
TRGFLARRRYRKILEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRASDMEKIQKLESELDRAATHRQNYEEKGKRYKASMEEKLAK
LQKHNSELEMQKEQIQLKLQEKTEELKEKMDDLTKQLFEDVQKEERQRILLEKSFELKTR
DYEEQIQTLKEEIKVLKDEKLHLQHQLEEEQAMSEGLKGEVARLSKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITKQLLESYDVEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQTENMKGKLEELSNQLNRNREEEGTQ
RKTIEAQNEIHTKEREKLMDKIQEMQEASEHLKKQFETESEVKSSFRQEASRLTMENRDL
EEELDMKDRVIKKLQDQVKTLTKTIEKTNDVRLSSGPKEYLGMLEYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKQVVKEHLEDFEL
LSFWLSNTCHFLNCLKQYSGEEEFMKHNSPHQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYS
TMCQNGLDPEIVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSHLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccgagctgtacacgcagtacaacagggtttggattccggatcctgaagaa
gtgtggaagtctgctgaaatagcaaaggactataaaattggcgacaaagtcctacaactc
ctgctggaggatggcacggagctggattattctgttgatccagaatctttgcctccactt
cgtaatcctgacatcctggtgggtgagaatgacctcacagccctcagctatctccacgag
cctgcagtgcttcacaatctcagaatccgatttgcagaatccaaactcatttacacctac
agtggaatcatcttggtggccatgaatccttacaagcagttgccgatatatggagatgcc
atcatccatgcctacagtgggcagaatatgggtgatatggacccacacatatttgctgtg
gcagaagaggcctacaagcagatggccagaaacaataaaaatcagtcaataattgtaagc
ggggagtcaggagctggaaagacagtatctgctcgctatgccatgagatactttgccacc
gtcagcaagtccagcagtaatgctcatgtggaagacaaggttctggcatcaaaccccata
actgaggctgttggaaatgccaagaccactcgcaatgacaatagcagtcggtttgggaaa
tacacagaaatcagttttgatgagagaaatcaaattataggagccaatatgagaacatac
ttgctggagaaatccagagttgtctttcaatcggaaaatgaacgaaattaccacattttc
tatcagctttgtgcatcagcacaacagtcggaatttaaacatcttaaattggcaagtgca
gaagaatttaattatacacgaatgggaggcagtaccgtcattgagggtgtgaatgacaga
gctgacatgatagagactcagaagaccttctcactactgggtttcaaagaagattttcag
atggatgtttttaaaatccttgcagccatcctacatctgggcaacgtggagatcatagca
gtgggcaacgagagatcggcggtcagtgaggacgacagtcacttgaaggtgttctgtgag
ctcctgggcctggagagcggcaaagtggctcagtggctatgcaatcgcaagatcatcacg
acctctgagacggtggtgaagcccatgaccaggccccaggccaccaatgccagggatgca
ctggccaaaaagatctatgcgcacctgtttgacttcatagtggagagaattaatcaagcc
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacagttttgcatcaattatgctaacgaaaagctgcaa
cagcagtttaatctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatt
ccttggactctgatagatttttatgacaaccaaccagttatcgacctgattgaagcaaaa
atgggcattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaac
tggcttcaaaagctgtataataattttatcaacaagaactctttgtttgaaaaaccgaga
atgtcaaacacatctttcatcatccaacactttgctgataaggtagagtataaatgtgaa
ggtttccttgagaaaaacagagacactgtctatgacatgttggttgaaatcctgagagca
agcaagtttcatctctgtgccaacttttttcaagaaaatccggttctttcttcccctttt
ggttcagcaatcacagttaaatctgcaaagccagtcatcaagccaaacaataagcatttc
cggagcacagtggggagcaagtttcgcagctctctgtacttgctcatggagaccctcaat
gccaccacgccccactatgttcggtgcatcaagccaaatgatgagaaattgccctttgaa
tttgactccaaaagaattgttcagcagctgcgagcctgcggtgttttggaaacgattcgc
attagtgcccagagctatccttctaggtggacatacatcgagttttacagtcgctacggg
atcctcatgaccaagcaggagctctcattcagtgataaaaaggaggtgtgcaaagtggtt
ttacacaggctcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcagggcaagtggcttatttagagaaactccggttggataaattaaggcagggttgt
gttgtgatacaaaagcacatccgaggctggctccagagaaaaaaattcctccgagagaga
cgagcagctctgatcattcagcagtacttccggggtcagcaaactgtgaggaaagctgtg
acggccacagccttaaaagaagcgtgggcagccataatcatccaaaagcactgtcgtggg
taccttgttcgcaatctgtaccagctgattcgtgtggccaccatcaccatccaggcctac
acccgaggattcctagcaaggaggaggtatcgaaagatactggaggaacacaaggctgtg
atccttcagaaatatgcccgggcgtggctggccagacgcagattccagaatatacgacga
tttgtgctcaacattcagcttacttatagagtccagcgtttgcagaaaaaactagaagat
cagaacaaagagaaccatgggctggtggagaagctgaccagcctggctgctcttcgggcc
agtgacatggagaagattcagaaactggaatcagaactagacagagcagccacccacagg
cagaattatgaggagaaggggaagagatacaaagcttccatggaagagaaattggcaaag
cttcagaagcataattcagaattggaaatgcaaaaggagcaaatacagctgaagctccag
gagaagactgaagagttgaaagaaaaaatggatgacctcaccaagcagctctttgaagat
gtgcagaaagaagaacgacaaagaatacttcttgaaaaaagttttgaactgaaaacacga
gactatgaggagcagatccagaccttgaaagaagaaattaaagttctcaaggatgaaaaa
ctgcacctgcagcatcagctggaggaagaacaggccatgtctgagggcctcaagggagag
gtggcccggttgagcaagcaggcaaagacaatctctgagtttgaaaaggagatagagcta
cttcagacacagaagatagacgtggaaaaacatgtgcagtcccagaaacgagaaatgaga
gaaaagatgtcagaaatcaccaaacagcttcttgagagctatgatgttgaagatgtaaga
agcaggctctctgtggaagatttggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacgtgttttggagagccatttccagtcccagaaggac
tgctatgaaaaggagattgaagctctgaacttcaaagtggtgcatctaagtcaagaaatc
aaccacctgcagaaattatttagagaggagaatgacatcaatgaaagtatccgtcatgaa
gttaccaggctaacgtcagaaaacatgatgataccagactttaaacagcaaatttcagaa
ctggagaaacagaagcaagatcttgaaattcgcctgaatgaacaaactgaaaacatgaaa
ggaaaactagaagaattgtctaatcaattgaatcgcaatcgagaagaggaaggaacacaa
agaaagaccatagaagcccaaaatgaaatacataccaaagagagagagaagctgatggat
aagattcaagaaatgcaggaggccagcgagcacttgaagaaacaatttgagactgaaagt
gaagtgaagagtagtttccggcaggaagcatctcgtctcactatggaaaacagggatctt
gaagaagagttggacatgaaggacagagtgattaaaaagttacaagatcaagtgaagact
ctaaccaagacgattgaaaaaaccaatgatgtgcgcttgtcatcaggacccaaggaatac
ctaggaatgctggaatacaaaagagaagatgaagccaagctcatccaaaacctcattctt
gacctgaagccccgcggtgtggtggtgaacatgatccccgggctgccggctcacatcctg
ttcatgtgtgttcgctatgcagactctctaaatgatgccaacatgctcaaatctctcatg
aacagtgcaattaatggcatcaagcaggtggttaaggaacatttagaagactttgagctg
ctgtccttttggctttccaatacctgtcatttcctcaattgcctgaagcagtacagtgga
gaagaggaattcatgaagcataatagtccacatcagaataaaaactgcttgaacaatttt
gacctttcagaatacagacagattcttagtgatgtggctatacgaatatatcatcagttc
attattgtaatggaaaataacattcaaccaataatagtgccgggcatgctggagtatgag
agtctgcagggcatttctggtctgaagcccacgggcttccggaagcggtcgtccagcata
gatgacacggatgcctacacaatgacctccatcctgcagcagctgagctacttctacagc
accatgtgccagaatggccttgaccccgaaatcgtgaggcaggcagtgaagcagctcttc
ttcttgatcggggcggttaccctgaacagcctcttcctgcgcaaggacatgtgctcctgc
aggaaagggatgcagataaggtgcaacatcagctacttagaagaatggcttaaagataag
aacttgcagaacagcttggccaaggaaactttggaacctctctctcaggcagcctggttg
cttcaggtcaagaagaccacagacagtgatgccaaggagatctatgagcgctgcacctcc
ctgtctgctgtgcagatcataaagatccttaattcatacacacctatagatgactttgag
aaaagagtgactccatccttcgtgcgcaaagtacaggctctcctaaatagcagagaggat
tcatcacacctgatgttggataccaaatatctctttcaagtcacatttccttttaccccc
tctccacatgctctggaaatgatccagatccccagcagtttcaagctaggctttctcaat
agattatag
DBGET
integrated database retrieval system
