Sus scrofa (pig): 100155592
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Entry
100155592 CDS
T01009
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100155592 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100155592 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
100155592 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF3322
DUF8106
Motif
Other DBs
NCBI-GeneID:
100155592
NCBI-ProteinID:
NP_001302707
UniProt:
A0A8D1KGW9
A0A5K1TZ27
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All DBs
Position
14:complement(106744320..106793606)
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AA seq
329 aa
AA seq
DB search
MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDVITAIDGENTSN
MTHLEAQNKIKGCTDNMTLTVARSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSASPRIITNQYNNPAGLYSSENISSFNSALESKTAASGQETNGRALD
HSQLPSGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVIPPEGYDVVTVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcaaattgttctccagggcccggggccgtggggcttccgtctcgtgggg
ggcaaggacttcgagcagcctctcgccatctctcgggtcactcccgggagcaaggctgcg
atagctaacttatgtattggagatgtaatcacagccattgacggggaaaatactagcaac
atgacccacttggaagctcagaacaaaatcaagggctgcacagacaacatgactctcacg
gtagccagatctgaacagaaaatctggtctcctctggtgacagaggaagggaaacgtcac
ccatacaagatgaatttagcctctgaaccccaagaggtcttacatataggaagcgcccac
aaccggagtgccatgccctttaccgcctcacctgcctccagcgcttcccccaggatcatc
acaaaccagtacaacaacccagctggcctctactcttctgaaaacatctccagcttcaac
agtgccttggagtcaaagacggcagccagtgggcaagagacgaatggcagagccttagac
cattctcagcttccaagcgggctcgtcatcgacaaagaatctgaagtttacaagatgctt
caggagaaacaggagttaaatgagcctccgaaacagtccacttcgttcctggttttgcag
gaaatcctggagtctgaggaaaaaggggatcccaacaagccctcaggattcagaagtgtt
aaggctccagtcaccaaagtggctgcatcgattggcaatgcccagaagttgcccatgtgt
gacaaatgtggcactggcattgttggcgtgtttgtgaaactgcgggaccgtcaccgccac
cctgagtgttacgtgtgcaccgactgtggcaccaacctgaaacagaagggccatttcttt
gtggaggatcagatctactgtgaaaagcacgcccgggagcgggtcattccacccgagggc
tacgacgtggtcactgtgtttcccaagtga
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integrated database retrieval system
