Sus scrofa (pig): 100155652
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Entry
100155652 CDS
T01009
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100155652 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100155652 (EFL1)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
GTPases
100155652 (EFL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
100155652
NCBI-ProteinID:
XP_020954529
Ensembl:
ENSSSCG00000001792
UniProt:
F1RID1
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All DBs
Position
7:complement(50839725..50977024)
Genome browser
AA seq
1120 aa
AA seq
DB search
MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQIRGITMKSSAISLHYAKDDEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTL
FTSKVLEERAERVTESQVNPHSEQGEQVYDWSTGLEDTDDSHLYFSPDQGNVVFTSAIDG
WGFGIEHFAKIYSQKTGIRKEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILGN
IWSLYDAVLKKDKEKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISQAVLAMVC
QKLPSPLDITAERVEKLMCAGSQTFDSLPPETQALKAAFMKCGSEDTAPVIIFVSKMFAV
DAKALPQNKPRPLTPEEIAERRERARRRHAEKLAAAQGQAPVEPTQDGSALEASPKEEEP
KGDEQQVLQEGNDQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLQRVPLGFSAPLDG
LPPVPHMACCTLENLYLLMGRELEDLEEVPPGNVLGIGGLQDFVLKSATLCTLPSCPPFI
PLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQ
RCLDDLKERFAKIQISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQTKEDQSKI
PEGIQVDSDGLVTITTPNKLATLCVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGKN
TQVIHQKTQEKIGEFKGRLEQHLTGRKWRNTVDQIWSFGPRKCGPNILVNKSEDFQNSVW
TGPDGKASQEANRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQTAS
DKQNQKQSDLVDAGQGEGETSSAGDENQEVHNGCSEPFEKRPSQKGESSLTDCYGPFSGQ
LIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRVLQEEMKEGTD
MFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEK
ADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaacagtttggataagatgattcaactccagaaaaacactgctaacatcagg
aatatctgtgttttggctcatgttgaccatggaaaaactactctggctgactgtcttata
tctagcaatggaatcatctccagtcgcctggcaggcaagttaaggtacatggacagcaga
gaagatgagcagatccgagggatcactatgaaatcgagcgccatttcactgcattatgca
aaagatgatgaggagtacctgattaatctgatagactctccaggacatgtggatttttcc
tcggaagtatcgacggccgttcgcatttgtgatgggtgcatcattgtggtggatgctgta
gaaggggtctgtccgcagacacaggccgttctgcgacaagcctggctggaaaacatccgt
ccggttttggtgattaataagatagatcgcttgatagtggaactgaaattcaccccgcaa
gaggcctattctcacctcaagaatattttagaacagattaatgcactcacaggaactctt
tttacttctaaagtcctagaagaaagagcagagagagtgactgaatcccaagtgaatcca
cattctgagcaaggagagcaggtgtatgactggagcactggcctggaggacacagatgat
tctcacctctacttctccccagatcagggaaatgtggtgtttacgagtgcaatagatggg
tggggctttggaatcgagcactttgccaaaatctacagtcaaaaaactggcatcagaaaa
gaagttcttttgaaaaccttgtggggagattattatataaatatgaaggctaagaagatt
atgaaggttgatcaggcaaaaggaaagaagcctttatttgtacagttgatcctgggaaat
atatggagtttgtatgatgctgtcttgaaaaaggacaaagaaaaaattgataaaatcgtg
acttctttaggattaaagattggagcccgggaggcacgacattcagatcctaaagttcag
atcaatgctatttgcagccagtggctacccatatctcaagctgttcttgctatggtgtgt
cagaagcttcctagtcctcttgatattacggccgagagagtggagaagctgatgtgtgca
ggatcacaaacattcgattcccttcctccagaaacccaggccctgaaagcagcttttatg
aaatgtggaagtgaagacactgctccagttattatctttgtttccaaaatgtttgcagtt
gatgctaaggctttgcctcagaataagccaagacctctcactccagaagagatcgctgag
aggcgtgagcgtgccagacgaaggcacgcggagaagctggcagcggcgcaggggcaggca
cccgtggagcccacccaggatgggagtgcccttgaggcgagtccaaaggaagaagagccg
aaaggtgatgagcaacaggtgctccaggaaggaaacgaccaagagtcttttattgccttt
gcccgagtattcagtggtgtggctcgaagaggaaagaaaatttttgtcttggggcccaaa
tacagccctcttgagtttttgcagcgggtgccattaggcttctcagccccactggatggc
ctccccccggtcccccacatggcatgctgtactctggaaaacctgtaccttctgatggga
agggaactggaagatctagaggaggtccctccagggaacgtgctaggtataggaggcctt
caagactttgtgctaaaatcagcaacactgtgtaccttgccatcctgcccgccattcata
cccctcaactttgaagccacccctattgtgagggttgccgttgaaccaaaacacccaagt
gaaatgcctcagctcgtcaaaggaatgaaactgttaaaccaagctgatccctgtgtccag
attttaattcaggaaacgggagagcacgttttagtcacagcaggggaagtccaccttcag
cgatgcctggatgacttaaaagaaagatttgcaaagattcaaatcagcgtatctgaaccc
attattccattcagagaaacaatcacaaaaccgcccaaagttgacatggtcaacgaagaa
ataggcaagcaacaaaaagttgcagtcatacaccaaacaaaagaggatcaaagtaaaatc
cctgaaggaatccaggttgactctgatgggcttgtcaccataacaactcccaataaactt
gccacgctctgtgtccgagccatgccccttccagaagaagtcactcagattctggaagaa
aatagtgatttgattcgttctatggaacagctgacctcctctttgaatgaaggcaaaaat
actcaagtgattcaccagaagacccaagagaaaattggggaattcaaaggaagactagag
caacacctaacagggagaaaatggaggaacactgttgaccagatctggtcctttggccca
agaaaatgtgggcccaacatattagtgaataaaagtgaagatttccagaactcagtgtgg
acaggtccagatggcaaagcctcccaggaagccaacagataccgagatttgggcaacagc
atcgtgagtggcttccagctagcaaccctctcgggccccatgtgtgaagagcctctcatg
ggtgtctgttttgttctggaaaaatgggacttaagtaaatttgaagagcaaacagcaagt
gataagcagaatcaaaaacaaagtgatctggtagacgcagggcagggggaaggtgaaacc
tcttctgctggagatgaaaaccaagaggtgcacaatggctgctctgagccgtttgagaag
aggccttcccagaaaggagagtcttcactcactgactgctatggacccttctcggggcag
ctgattgctaccatgaaagaagcatgtcgctatgcactacaggtgaaacctcagcgtctg
atggcagcaatgtacacgtgtgacatcatggcgaccagtgatgttctcggtcgggtctat
gctgtcttgtccaagagagagggtcgagtgctccaagaagaaatgaaagaagggacggac
atgttcatcatcaaggccgtgctgcctgtggccgaaagctttggctttgctgatgaaatc
aggaagaggacaagtggcctggccagcccgcagctggtgttcagccattgggagatcatc
cccagcgaccctttctgggtgccaaccactgaggaggagtacctgcactttggggaaaag
gctgattccgagaaccaggcccggaagtacatgaacgcggtgcgcaagcggaagggtctt
tatgtggaagaaaagattgtggagcacgcagagaagcagagaaccctcagcaaaaataag
taa
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