Sus scrofa (pig): 100155674
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Entry
100155674 CDS
T01009
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100155674 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
100155674 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100155674 (TAF2)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100155674 (TAF2)
Peptidases and inhibitors [BR:
ssc01002
]
Metallo peptidases
Family M1
100155674 (TAF2)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100155674 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
100155674 (TAF2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100155674 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
SR-25
AP3D1
Motif
Other DBs
NCBI-GeneID:
100155674
NCBI-ProteinID:
XP_020946210
Ensembl:
ENSSSCG00000006000
Vega:
OTTSUSG00000002602
LinkDB
All DBs
Position
4:19180215..19267416
Genome browser
AA seq
1199 aa
AA seq
DB search
MPPTGLEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHNESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI
PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPSLFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG
TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAIAGNQET
AVNPSSHAQLVGFQNPFSNSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPAS
SRSASVPQHSSGCDGTPITKPQWSMELGRKGTGKEQSPLEMSMNPVAAAPLSVFTKESTS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPSLSD
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgactggtttggagcccgccagaatgaacaggaagaaaggagacaagggcttt
gaaagcccaaggccatataagctaacccatcaggtcgtctgcatcaacaacataaacttc
cagagaaaatctgttgtgggatttgtggaactgactatatttcccacagttgcaaactta
aacagaatcaaattgaacagcaaacagtgtagaatataccgagtaaggatcaatgattta
gaagctgcttttatttacaatgatccaaccttggaagtttgtcacaatgaatcaaaacag
agaaatctcaattatttttccaatgcttatgcagctgcagttagtgctgtggatcctgat
gcaggaaatggagaactttgcattaaggttccgtcagagttatggaaacacgttgatgaa
ttaaaggtcctaaagatacacatcaatttttctttggatcagccaaaaggaggtcttcat
tttgtggtacccagtgtagagggaagtatggcagagagaggtgctcatgttttctcttgt
gggtatcaaaattccacaagattttggttcccatgtgttgattcatactcagaattatgt
acatggaaattagaatttacagtggatgctgcaatggtggctgtttccaatggagatttg
gtggagacagtatatacccatgatatgaggaagaagacctttcattacatgcttaccatt
ccaacagctgcatcaaatatctccttggccattggaccttttgaaatacttgtagatcca
tatatgcatgaggttactcatttttgtttacctcaacttctcccattgcttaaacacacc
acatcatatcttcatgaagtttttgaattttatgaagaaattcttacatgtcgataccca
tattcctgttttaagactgtattcattgatgaggcttatgttgaagtggctgcttatgct
tccatgagcatttttagcacaaatctgttacacagtgccatgattatagatgagacacct
ttgactagaaggtgtttagcccagtccttggcccagcagttttttggatgtttcatatcc
agaatgtcctggtctgatgaatgggtattgaagggcatttcaggctatatttatggtctt
tggatgaaaaaaacttttggtgttaatgagtatcgccattggattaaagaggagctggac
aaaatagtggcatatgaactgaaaactggtggagttttactacatcccatatttggtgga
ggaaaagagaaggataatccggcgtcccatctacacttttcaataaaacatccacataca
ctctcctgggaatactacactatgtttcagtgtaaagctcacctggtgatgagattgatt
gaaaataggatcagtatggaatttatgttacaagttttcaataaactgctaagtttggct
agtactgcttcatctcagaagttccagtcacatatgtggagtcagatgttggtttccaca
tctgggtttttgaaatccatctcgaatgtctctggcaaagacatccagcctttaataaag
caatgggttgaccagagtggagtggtaaaattttatggaagttttgcctttaatagaaaa
cgcaatgtcttagaattagaaataaaacaagattatacatctcctggaactcagaagtat
gtgggaccacttaaagttacagtgcaggagttagatggatccttcaatcatacattgcaa
attgaagaaaacagtcttaaacacgatataccctgccattccaaaagtagaagaaataag
aagaagaagattccattgatgaatggggaagaagttgacatggatctttctgcaatggat
gctgattctcctttgctgtggataaggatagacccagacatgtcagtgttgaggaaagta
gaatttgagcaagctgactttatgtggcagtatcagctccgctatgagagggatgttgtt
gcacagcaagagtccattttagctttggaaaagtttcctactccagcatctcgacttgcc
ctcactgacatattagaacaagagcagtgtttctaccgagtgagaatgtcagcttgcttc
tgccttgcaaagattgcaaattcaatggtgagcacgtggacaggacctccagccatgaag
tcactctttactagaatgttttgttgtaaaacttgtccaaacattgtgaaaacaaacaac
ttcatgagctttcaaagttactttctacagaagactatgccagttgccatggctttatta
agagatgtccataacctttgccccaaagaagtcttaacatttattttagacttaatcaag
tacaacgacaacagaaaaaataagttttcagataactattaccgtgcagaaatgattgat
gcccttgccaactctgttacgcctgcagtcagtgtgaataatgaagttcgaactttggac
aacttaaatccagatgtgcgactcattcttgaagaaatcaccaggtttttgaatatggag
aaacttcttccaagttatagacacaccatcactgtcagttgtttgagagccatacgagtg
cttcagaaaaatgggcacgtgccgagcgatccatctctttttaaatcttatgcagaatac
ggccattttgtggacataaggatagcagctttggaagcagttgttgattatactaaagtg
gacaggagttatgaagaactgcagtggctgcttaatatgattcaaaatgaccctgtaccc
tatgtaagacataagattctaaacatgttgactaagaacccaccatttactaaaaacatg
gagtctcccttatgcaatgaagctttggtagatcaactctggaaacttatgaattccggt
acttcccatgactggagattacggtgtggtgctgtggacttgtacttcacactttttggc
ctcagtagaccttcctgcttacccttgccagaactcggcttggtccttaatctgaaagag
aaaaaagctgtcttgaatccgaccataattccagaggccatagcaggcaaccaagagact
gcagttaatccaagcagtcacgcgcagctagttggatttcagaaccctttttcaaattct
caagatgaagaggagattgatatggatactgttcatgatagccaggcgttcatttcccat
catttaaacatgcttgaaaggccatcaactccaggtctctctaaatatcggccagccagc
tcccgatctgcttcagtgccccagcactcatcgggctgtgatggcacacccatcacaaaa
ccccagtggagtatggaacttggacgtaagggaacaggtaaagaacagtcacctctggag
atgagtatgaatccagttgcagcagctccactctcagtatttactaaagaatctacgtcc
tccaaacacagcgaccaccatcaccaccatcaccacgagcacaagaagaagaagaagaag
cacaaacataagcataagcacaagcataagcacgacagtaaagaaaaggacaaggagcct
ttcactttctccagccctgccagcggcaggtctattcgttctccttctctttcagattga
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integrated database retrieval system
