Sus scrofa (pig): 100155686
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Entry
100155686 CDS
T01009
Symbol
SORCS1
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100155686 (SORCS1)
Membrane trafficking [BR:
ssc04131
]
Protein recycling
Others
Others
100155686 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100155686
NCBI-ProteinID:
XP_013839166
Ensembl:
ENSSSCG00000030026
Vega:
OTTSUSG00000002491
LinkDB
All DBs
Position
14:complement(117479817..118009485)
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AA seq
1179 aa
AA seq
DB search
MGKVGAGGCSPAGLSALLAGAGFLVLCAPGACGGDSCCPPLPPSSAPRWVPTPRGLPHQG
PRGRAPATPLPLLGRPLFAVSPGDRVLSLERAPGTGASVAVAPRSGRRRRSGEAQEKADP
EEGTNRSPRGVLRDRGQQESGTLERDPDKATRFRLEELRLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSA
EFGRRWQLIQEGVVPNRFYWSVMGSNKEPDLVHLEARTVDGHSQYLTCRMQNCTEANRNK
PFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNTFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIDNQVKTFITYNKGRDWRLLQAPDTDLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGNTWRQIFEEEHSVLYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGKYAGAMESEP
CVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTLIQXDFGDG
IAVSYVNLSSTEDGIKHVYHNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLSFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGVPGQHI
LVAVLPGLPTAAELFVLPYQDPTGENKRSAEDLEQISELLIHKLNQNSVHFELKPGVQVL
VHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKE
REMVSRVSHPESRPHIPQTELRRPGQLIDEKVESQLIGE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggtgccggcggctgctccccagccgggctgagcgcgctcctcgctggc
gcggggttcttggtcctctgcgccccgggcgcctgcggaggcgactcctgctgccctccg
ctgcctcccagctcggctccacgctgggttccgaccccgcgggggcttcctcaccagggg
ccgcgaggtagggctcctgccacgcctctgcccctgctcggacgccccctgttcgcagtg
tcccccggagaccgagtgctatccctggagcgggccccgggcaccggggcttcggtggcg
gttgctccacgctctggccggagaagacggagtggagaggctcaagagaaggcagacccg
gaagagggcacgaatagaagcccccgaggagtgctaagggacagagggcagcaggagtct
gggactctggagcgggacccggacaaagccactcgcttccggctggaggagctgagactg
accagcaccacgttcgcgctgacaggcgactccgcacacaatcaagccatggtccactgg
tctggccacaacagtagcgtgattctcattttgacaaagctctatgactataacctgggg
agcatcacagagagctcgctttggaggtcaactgattatgggacaacctatgagaagctg
aatgataaagttggattgaaaacaattttaagctatctctacgtgtgtcctaccaacaag
cgtaagattatgttgctcacagacccggagattgagagcagtttactcatcagctcagac
gaaggggccacctatcaaaagtaccggctgaacttttacatccagagtttacttttccac
cccaagcaagaggactggattctggcgtacagccaggaccaaaagttatacagctctgct
gaatttggaagaaggtggcagcttatccaggaaggggttgtaccgaacaggttctactgg
tctgtgatggggtcaaacaaggaaccagatcttgtgcatctcgaggccagaactgtggat
ggtcattcacaatatctgacttgcagaatgcagaactgcacagaggccaacagaaataaa
cctttcccaggctacattgacccagactctttgattgtccaggacgattacgtgtttgtt
cagctgacgtcaggaggacggccacattactacgtgtcctatcgaaggaatacctttgcc
cagatgaagctgcccaagtatgctttgcctaaggacatgcacgtcatcagcactgatgag
aaccaagtgtttgcagccgtccaagaatggaaccaaaatgacacatacaacctctacatc
tcagataccagaggtgtctacttcaccctggccttggagaatgtccagagcagtagaggc
cctgagggcaatgtcatgattgacctctatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgacaaccaagtgaagactttcatcacgtacaacaaaggcagagac
tggcgtttgctgcaggcaccagacacggacctcaggggggaccctgtgcactgcttgctg
ccctactgctcactacaccttcaccttaaggtctctgaaaatccctacacctcagggatc
attgccagccgagacacagctcccagcatcatagtggcttcaggtaacataggctccgag
ttgtcagacagcgacatcagcatgtttgtctcttcagatgcagggaacacttggaggcag
atctttgaagaagagcacagcgttttgtatctggatcaaggtggagtcctggtcgccatg
aagcacacatctctcccaattcgacatctctggttgagttttgatgaagggaggtcttgg
agcaaatacagtttcacatctattccactttttgtggatggggttctgggtgagcctggg
gaagaaactctaatcatgacagtgtttggacactttagccaccgctctgaatggcagctg
gtcaaagtggactacaagtctattttcgataggcgatgtgccgaggaggactacagaccc
tggcagctgcacagccagggggaagcatgcatcatgggagcaaaaaggatatataagaag
agaaaatcggagcggaaatgtatgcaaggaaaatacgcaggagctatggagtcagagccc
tgcgtctgcacagaggccgattttgactgtgactacggttatgagcgacacagcaatggc
cagtgcctgccagcattttggttcaatccatcttctctgtcgaaggactgcagcttggga
cagagttacctcaatagcactgggtatcgaaaggtggtttccaataactgcacggatgga
gtgagagaacagtacacagccaaaccgcagaagtgtccagggaaggcacctcgagggctc
cggattgtcactgctgatggaaagctaacagcagagcaaggccacaatgtgactctcatg
gttcaattggaagagggcgacgtccagaggacgctcatccagntggacttcggggacggc
atcgcagtgtcttatgtcaacctcagctccacagaagatgggatcaagcacgtctatcac
aatgtgggcattttccgagtgaccgtgcaggtggacaacagtctggggtctgacagcgcc
gtcctgtacttacatgtaacttgtcccctggagcacgtacacctgtctcttccctttgtc
accacgaagaacaaagaggtcaatgcgactgccgtgctgtggcccagccaggtgggcacc
ctcacctacgtgtggtggtacggaaacaacacggagcccttgatcaccctggagggaagc
atatcgttcaagttcacttccgaagggatgaacaccatcactgtgcaagtctcagccggg
aatgccatcctgcaggacacgaaaaccatcgcggtgtatgaggaattccgatctcttcgc
ctgtccttttctccaaacctggacgactacaacccggacatccctgagtggagaagggac
atcagccgagtcatcaaaaagtccctggtggaagccactggggttcctggccagcacatc
ttggtggcagtcctccctggcttacccactgccgctgagctctttgtcctgccctatcag
gatccgacaggagaaaacaaacggtcagctgaagatctggagcagatatcggaactgcta
attcacaagctcaaccaaaactctgtgcactttgagctgaagcctggtgtccaagtcctt
gtccatgcagcccacttgacagcagccccgctggtggacctcactccgacccacagtgga
tctgccatgctgatgctgctgtccgtggtgtttgtggggctggccgtgttcgtcatctac
aagtttaaaaggaagatcccggggattaatgtttatgcccagatgcagaatgagaaagaa
cgagagatggtcagtcgagtcagtcaccctgaaagcaggccccatatccctcagactgaa
ctcaggcggcctggccagctgatagatgagaaggtggaatcccagctcataggagagtag
DBGET
integrated database retrieval system
