Sus scrofa (pig): 100155712
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Entry
100155712 CDS
T01009
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03082
ATP-dependent chromatin remodeling
ssc04714
Thermogenesis
ssc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100155712 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100155712 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100155712 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100155712 (SMARCD1)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100155712 (SMARCD1)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100155712 (SMARCD1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100155712 (SMARCD1)
PBAF complex
100155712 (SMARCD1)
GBAF(ncBAF) complex
100155712 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
100155712
NCBI-ProteinID:
NP_001231542
UniProt:
A0A4X1WCH9
LinkDB
All DBs
Position
5:15992348..16005778
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagtggcggcgccggagcttcaggc
ggggcgggcgcggcggctgccctgggcccgggcgggactccggggcctccggtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctaccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcacctcagcagatccagcaggtccagcaacaggcggtccaaaatcggaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaagcgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacgcctcctggaggattcagcc
ttgtccaaatatgatgccaccaagcaaaagaggaagttctcttctttttttaagtccttg
gtgatcgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggatggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgtgctactgatgctggattaccagcctccccagttcaaattagaccctcga
ctggctcggctgctgggcatccacacccagacccgtccagtgatcatccaagcactgtgg
caatatattaagacacataagctccaggacccacacgagcgggagtttgtcatctgtgac
aagtacctccaacagatctttgaatctcagcgtatgaagttttcagagatcccccaacgg
ctccacgccttgcttatgccaccagagccgatcatcattaatcacgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggacgataccctg
aagacccagatgaattctttcctactgtccaccgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagaaactatcaatcagctgaagacccagcgggagttc
atgctgagcttcgccagagaccctcagggtttcatcaacgactggcttcagtcccagtgc
cgggacctcaagaccatgactgacgtggtgggtaacccagaggaagagcgccgagctgag
ttctacttccagccgtgggcgcaggaggccgtgtgccggtacttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccgaaacacatag
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