Sus scrofa (pig): 100155764
Help
Entry
100155764 CDS
T01009
Symbol
DCAF13
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100155764 (DCAF13)
04121 Ubiquitin system [BR:
ssc04121
]
100155764 (DCAF13)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
Other 90S particles
100155764 (DCAF13)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100155764 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
MIOS_WD40
KNTC1_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
100155764
NCBI-ProteinID:
XP_005662969
Ensembl:
ENSSSCG00000006048
UniProt:
A0A8D1RCH8
A0A480V443
LinkDB
All DBs
Position
4:complement(33672867..33704888)
Genome browser
AA seq
559 aa
AA seq
DB search
MRDGRSHTPESAKRAGHLSQNPALPRLGGLAAHAAGRGSENAVEAPPLANLCPQNYGAPG
GGPAERPGFRSGSHMTGSSXEEAEVACVDWGSPSGSRHRGRERKARGIARISSKMKVKML
SRNPDNYVRETKLDLQRVPRNYDPALHPFEXPREYVRALNATKLERVFAKPFLASLDGHR
DGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFCGTSFFT
VGDDKTVKQWKMDGPSYGEDEEPLHTILGKTVYTGIDHHWKEAIFATCGQQVDIWDEQRT
NPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTIGW
NPMEAFIFTAANEDYNLYTFDMRALDTPIMVHMDHVSAVLDVDYSPTGKEFVSASFDKSI
RIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSR
EKAATDYNQRLKEKFQHHPHIKRISRHRHLPKSIYSQIQEQRIMKEARRRKELNRIKHSK
PGSVRIVSEKKKHIVAVVK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacggtcgcagccacacgccggagagcgcgaagagggcggggcacctcagccaa
aaccccgccctgcctcgcctggggggactggcggcgcacgccgctgggcgtggaagcgag
aacgcagttgaagcaccgcccctcgccaacctttgtccgcaaaactatggagcgccgggg
ggggggccagctgagcggccgggtttccgctctggaagtcacatgacaggaagtagttga
gaagaagcggaagtggcatgtgttgactggggtagcccgtcaggcagccgccacaggggt
cgggagagaaaggcgcgcggtatcgcaaggattagcagcaaaatgaaggtgaagatgctg
agccggaacccggacaactatgtccgcgaaactaaattggacttacagagagttccaaga
aactatgatcctgccttacatccttttgagntcccgcgagaatatgtaagagctttaaat
gctaccaaactggaacgagtgtttgcaaaaccattccttgcttccctggatggtcaccga
gatggagtcaattgcttggccaagcatccaaagagcctggccactgtcctttctggggca
tgtgatggagaggttagaatttggaacttaactaaacgaaaatgtatccgtacaatacaa
gcgcatgaaggttttgtacgaggaatatgtactcgcttttgcggaacttcttttttcact
gttggtgatgacaaaactgtgaagcagtggaaaatggatggaccaagctatggagaagat
gaggaaccattgcatacaatattaggaaagacagtatatacaggaattgatcatcactgg
aaagaagctatttttgccacatgtggacagcaagtagacatttgggatgaacaaagaacc
aatcctatttgttcaatgacctggggatttgacagtataagcagtgttaagtttaaccca
attgagacatttctcttgggaagttgtgcttctgacaggaatatagtgctatatgatatg
aggcaagctactcctctgaaaaaggtcatcttagatatgagaacaaatacaattggctgg
aaccctatggaagctttcatttttactgcagcaaacgaagattacaacttatatactttt
gatatgcgtgcgctggacacccctataatggtgcatatggatcatgtgtctgcggtgctt
gatgtggattactctcccactgggaaagagtttgtgtctgctagttttgataagtctatt
cgaatctttcctgtggacaaaagtagaagcagagaagtgtatcatacaaagagaatgcag
catgttatctgtgtaaaatggacttctgacagcaagtacattatgtgtggatctgatgaa
atgaacattcgtctatggaaagctaatgcctctgaaaaattgggtgtgcttacatcacga
gaaaaagcagccacagattataatcagaggctaaaggagaaattccaacatcatcctcat
ataaaacgtatctctcgtcaccgacatctaccaaaatctatctacagccagattcaggaa
cagcgtatcatgaaagaagctcgtcgacgaaaggaactgaatcgtatcaaacatagcaag
cctggatctgtacggattgtgtcagagaagaagaaacacatagtggcagttgtgaaataa
DBGET
integrated database retrieval system
