Sus scrofa (pig): 100156098
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Entry
100156098 CDS
T01009
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04330
Notch signaling pathway
ssc05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100156098 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100156098 (NCSTN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100156098
NCBI-ProteinID:
XP_001928821
Ensembl:
ENSSSCG00000006385
Vega:
OTTSUSG00000000707
UniProt:
A0A8D1LG70
A0A286ZSI3
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All DBs
Position
4:complement(90121209..90142934)
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AA seq
709 aa
AA seq
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MATAGGGSVAGPGSRSFLRLLPFCVLLAGLCKGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSVSGDTGVIHVVEKEEDLQWVLTDGPNPPYMVLLEGTLFTRNLMEKLKGRTGRIAG
LAVSLAKPSPTSGFSPSVQCPNDGFGIYSDSYGPEFAHCREILWNSLGNGLAYEDFSFPI
FLLEDEDETNIIKQCYRDHNLSQNGSAPAFPLCAMQLFSHMHAVISTVTCMRRSSIQSTF
SINPEIVCDPLSDYNVWSMLKPINTSGTLEPGDRVVVAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGETFDYIGSSRMVYDMEKGKFPVQLENID
SFVELGQVALRNSLALWMHTDPMSQKNETVHNQVEELLTTLEKSGAGVPTVVLRRPNQTQ
PLPPSSLQRFLRARNISGVVLADHSTVFHNHYYQSVYDTAENINVSYPEWQSPEEDLNFV
TDTAKALADVATVLSRALYQLAGGTNFSNTIQADPKTVTRLLYGFLVRANNSWFQSILRQ
DLRSYLGDGPLQHYIAVSSPTNTTYIVQYALANLTGKVMDLTREQCQDPSKIPTENKDLY
EYAWVQGPLNPNETDRLPRCVRSTARLARALSPAFELRQWGSTEYSTWTESRWKDIRARI
FLIASKELEFITLMVGFGILVFSLVVTYCINAKADVLFIAPREPGSVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccacagctgggggcggctctgtggccggcccgggaagtcggagtttccttcgcctt
ctgcctttctgcgttcttcttgcaggcttgtgcaaaggaaactcagtggagaggaagatc
tacatccctttaaataaaacagctccctgtgtccgtctgctcaatgccactcatcagatt
ggctgccagtcttccgttagcggggatacaggggttatccacgtagtagagaaggaagag
gacctgcagtgggtgttgaccgatggccctaaccccccttacatggttctgctggaaggc
acactctttaccaggaatctgatggagaagctgaaggggagaaccggccgaattgctggt
cttgcagtgtctttagccaagcccagtcccacctcgggcttctctcctagtgtacagtgt
cccaatgatgggtttggaatttactccgactcctatgggccagagtttgctcactgcaga
gagatactgtggaactccctgggcaatggcttggcttatgaagactttagtttccccatc
ttccttcttgaagatgaagatgaaactaatatcattaaacagtgctaccgagatcacaac
ctgagtcagaatggctcggctccagccttcccgctgtgtgccatgcagctcttctcacac
atgcatgctgtcatcagcactgtcacctgcatgcggcgcagctccatccagagcaccttc
agcatcaacccagaaatcgtctgtgatcccctctccgactacaatgtgtggagcatgctt
aagcctataaatacatctgggacgttggagcctggtgacagggttgtggtggctgccacc
cgactggacagtcgttcctttttctggaatgtggccccaggggcggagagtgctgttgcc
tccttcgtcacccagctggctgccgctgaagctctgcagaaggcacccgatgtgaccacc
ctgccccgcaatgtcatgtttgtcttcttccaaggggaaacttttgactacattggcagc
tcaagaatggtctacgatatggagaagggcaagtttcctgtgcagttagagaacattgac
tcattcgtggagctgggacaggtggccttaagaaattcgctagcgctttggatgcacaca
gaccccatgtctcagaaaaatgaaactgtacacaaccaggtggaggagctcctgaccaca
ctggagaagagtggtgccggcgtccccaccgtcgtcctcaggaggccgaatcagacgcag
cctctccccccatcttctctgcagcgatttcttcgcgctcgaaacatctctggcgttgtt
cttgccgaccactccactgtcttccataaccactactaccagagcgtttacgacactgcc
gagaacattaacgtgagctaccctgagtggcagagccctgaagaggacctgaactttgtg
acagacactgccaaggctctggcagatgtggccacggtgctgtcacgtgcactgtaccag
cttgcaggaggaaccaacttcagcaataccattcaggctgatcccaaaacggttacccgc
ctgctctacgggttcctggttagagccaacaactcatggttccagtccatcctcaggcaa
gacctaaggtcctacttgggcgacgggcctcttcagcattacatagccgtctccagcccc
accaacaccacatacatcgtgcagtatgccctggcaaatttgactggcaaggtgatggac
cttacccgagagcagtgccaggatccaagtaaaatccccactgaaaacaaagacctgtat
gagtacgcttgggttcagggccctttgaatcccaacgagacagaccggctgccccggtgt
gtgcgttccacggcacgactggccagggccttgtcccctgcctttgaactgaggcagtgg
ggctctactgagtactccacatggactgagagccgctggaaagatatccgcgcccggata
tttctgatagccagcaaagaactggagttcatcactctcatggtgggcttcggcatcctc
gtcttctctctcgttgtcacctactgcatcaatgccaaagccgacgtccttttcattgct
ccccgggaaccgggatctgtgtcttactga
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