Sus scrofa (pig): 100156116
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Entry
100156116 CDS
T01009
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100156116 (BTAF1)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100156116 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
TPR_Trm732_C
UTP20
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
100156116
NCBI-ProteinID:
XP_003359339
Ensembl:
ENSSSCG00000010467
UniProt:
A0A287AFM0
A0A8D1NW12
LinkDB
All DBs
Position
14:103530746..103641082
Genome browser
AA seq
1849 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQETTSESAMEDSSTTDRLNFDRFDICRLLQHGASLLG
SAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTS
AALVNKQPTLQAAELIDSEFRTGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDG
EPEEKRRKIANVVINQSANDSKVLIDNIPDSSPLIEETNEWPLESFCEELCNDLFNPSWE
VRHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVS
DEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVR
QDVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTPKVPFIINTLWDAL
LELDDLTASTNSIMTLLSSLLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALET
LFTLLSTQDQNSSSWLIPILPDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVV
AAACPWMGAWLCLMMQPSHLPIDLNMLLEVKARAKEKTGGKVRQGQSQSKEVLQEYIAGA
DTIMEDPATRDFVVMRARMMAAKLLGALCCCICDPGVNVVTQEIKPAESLGQLLLFHLNS
KSALQRISVALVICEWAALQKECRAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQ
LISSLADAHIEVGNRVNSNVFTIDQANDLVTTVFNEVTSSFDLNPPVLQQLDSKRQQVQM
TVTETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQC
IAKLLQQCTARTPCPNSKIVKNLCSSLCVDPYLTPSVTCPVPTQSGQENSKGSNSEKDGM
HHTVTKHRGIITLYRHQKAAFAITSRRGPTPKAVKAQIADLPAGGSGNILVELDEAQKPY
LVQRRGAEFALTTIVKHFGGEMAVKLPHLWDAMVGPLRNTININNFDGKSLLEKGDGPAQ
ELVNSLQVFETAAVSMDSELHPLLVQHLPHLYMCLQYPSTAVRHMAARCVGVMSKIATME
TMNIFLEKVLPWLGAIDDNIKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTD
SVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYEIPV
PINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSK
LAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERVRLQHQVKRHNLIV
ASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNV
LELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFL
LRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKP
KLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALK
QLLLDCGLGNGSTSESGTESIVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGS
IPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRA
HRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTL
DKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccaggcttgaccgtctttttatcttattggatactggcacaactccagtt
acaagaaaagctgctgcacaacaacttggagaagtggtgaagcttcatccccatgaacta
aataatctcttatctaaagtgttgatatatttaaggagtacaaattgggatactcggatt
gcagcaggacaagctgttgaagctatagtgaaaaatgtacctgaatggaatccggtgcca
agaaccaaacaagaaactacttcagaaagtgctatggaagattcatcaactacagatcga
ttgaattttgacagatttgatatatgtagattgttacaacatggggcatcacttttggga
tctgctggtgcagagtttgaagtacaagatgaaaaatcaggtgaagtggatcctaaggag
aggatagcacgccaacgaaaactattgcagaagaaacttggccttaatatgggagaagcc
attggaatgagcactgaagaactcttcaatgatgaagatttggattatactccaacatca
gcagcccttgtaaacaaacaacctactctccaggcagctgaattgattgactcagagttc
cgaacaggaatgagcaatagacaaaagaacaaagccaaaagaatggccaagttatttgca
aaacagagatccagggatgcagtggaaactaatgagaagagcaatgatagcactgatggg
gaaccagaagaaaagagacggaaaatagcaaatgttgttataaatcagtctgcaaatgat
tccaaagtcctgattgataatattccagacagttctcctttaattgaagagacaaacgaa
tggcctttggaaagcttttgtgaagaactttgcaatgatctttttaatccctcctgggag
gttcgacatggagcaggcactggacttagggaaatccttaaagctcatgggaaaagtggt
ggtaaaatgggagatagcactttagaagagatgattcagcagcatcaggagtggttggaa
gacttggttattagactcctttgtgtgtttgcattagacagatttggcgactttgtttct
gatgaagttgtggcaccggttcgtgaaacttgtgctcaaacattaggtgtggtgttaaaa
cacatgaatgaaacgggagttcataagactgtggatgtgctgctcaaattacttacacaa
gaacagtgggaagttagacatggtggtctgctgggaataaaatacgctttggcagttcgt
caggatgtaattaatactttattgcctaaagttttaactagaataattgaaggactccag
gatcttgacgatgatgtcagagctgttgctgcagcatcattagtccctgtggtagaaagc
cttgtgtatcttcagacgccaaaagtacccttcattataaatacattatgggatgctctt
ttggaactagatgatctaacagcttcaacaaatagtattatgactcttctttcatccttg
ttaacttatcctcaggttcagcaatgcagtattcaacagtcactcacagttttagttcca
cgtgtctggccttttttgcatcatactatatcatcagttcgaagagcagcattggaaact
ctgttcactttattatcaacccaggaccagaactcttcatcgtggcttatacctatcctt
cctgatatgcttcgacatatttttcagttttgtgttttagaaagcagccaggaaattctg
gacctcattcacaaggtttggatggaattgttgagcaaggcttcagttcagtatgtagta
gcagctgcttgtccatggatgggtgcttggctttgcttaatgatgcagccttctcattta
cctattgatttaaatatgttgctggaagtaaaagctagagccaaggaaaaaacgggtggt
aaggtgcgccaaggccaaagccagagtaaagaagtactgcaggagtacattgcaggtgca
gatacaattatggaagaccccgccaccagggattttgtggttatgcgggccagaatgatg
gcagccaagttgttaggagcactttgttgctgtatttgtgatccaggtgtaaatgtggta
acccaagaaattaaaccagctgaatcccttggccagttactactcttccatttgaactcc
aaatctgccttacagagaattagtgtagctttggtaatctgtgaatgggctgctttacag
aaggagtgtagagctgttaccctagctgtgcagccacgtttacttgatatcctttcagaa
catttatattatgatgaaattgccgttccattcacacgaatgcagaatgagtgtaaacag
ctgatttcatcattagctgatgcacatattgaagttggtaatagagtaaacagtaatgtt
tttacaatagatcaagccaatgacctggtcactactgtttttaatgaagtcacatcatct
tttgatttaaatcctccagtgttacagcaattagatagtaaacgacagcaggtccaaatg
acagttacagagaccaaccaggagtggcaagtgttgcagttgagagtgcatacttttgct
gcatgtgcagttgtgagcttgcagcaacttccagagaaattaaatcctattataaaacca
ttaatggagaccattaaaaaagaagagaatacactggtacagaactatgcagctcagtgc
atagccaaactacttcagcagtgcaccgcaaggacgccctgtcccaattcaaaaattgtt
aaaaacctctgtagctcactttgtgtggacccatatctaactccttctgtcacatgtcca
gtaccaacacagagtggccaggaaaattctaaaggatccaactccgaaaaagatggaatg
catcatactgtcaccaagcacaggggtataattacactctataggcatcagaaggctgct
tttgcaatcacaagtaggcgaggtcctacccccaaagcagtaaaagctcaaatagcggat
cttcctgcaggaggtagtggaaatatccttgttgaacttgatgaggcccagaagccttac
ctagtacaacggagaggagctgaatttgccctgacaactatagtgaagcattttggtggt
gaaatggcagtgaagttgccacatctctgggatgctatggttggtccattgaggaacaca
atcaacataaataattttgatggaaagtccctcctggaaaagggagatggccctgcccaa
gaattggtgaattctctgcaagtttttgaaacagcagctgtgtcaatggattctgagctt
catcccttgttggtacagcatttgcctcatctttatatgtgccttcagtaccccagcact
gcagtgaggcacatggctgctcgttgtgtaggtgtcatgagcaagatagctaccatggaa
acaatgaatattttcttggagaaggttcttccatggctgggagcaattgacgacaatatc
aaacaagagggtgcaattgaagcacttgcctgtgtaatggaacaactggatgtcggtatt
gttccatatattgtccttttagttgtgcctgtgttgggaagaatgagtgatcagacagac
agtgtaagattcatggctacgcagtgctttgcaacactaattagactcatgccacttgag
gcaggcattccagatcctccaaatatgtcagaagaattaatccagttgaaagccaaggag
cgacactttttggagcaattgttagatgggaaaaaattagaaaattatgaaattccagta
ccaatcaatgctgaactcagaaaatatcagcaggatggtgtgaactggttagcatttctt
aataagtataagcttcacggaattctgtgtgatgacatgggtttaggaaaaactttacaa
tccatctgcattctagcaggagatcactgtcacagggcccaggaatatgcaagatctaaa
ttggcagaatgtatgccacttccttccttggtggtttgtccgccaacattaactggccat
tgggtggatgaagtgggtaaattttgctccagagaatatctcaatccactgcattatact
ggacctcccactgaaagagtaaggttacagcaccaggtgaaaaggcacaatctgatagtg
gcttcatatgatgttgtgagaaatgacatagatttctttagaaatattaaatttaactac
tgtattcttgatgaaggccatgtcattaaaaatggaaaaacaaaattgtcaaaagcagta
aaacaactgactgctaattatagaattattctctctggaacaccaatccagaacaacgtt
ttggagctgtggtcattatttgatttccttatgccaggatttttggggactgaacgtcag
tttgctgctcgatacggtaaacctatattagcaagtagggatgctcgaagttccagtcga
gaacaagaagcaggtgttcttgcgatggatgcactgcaccgccaagtcctgccatttctt
ttgagaagaatgaaagaagatgttttgcaggatctaccacccaaaatcattcaagactat
tactgtactcttagtcctctccaggttcagctctatgaggattttgctaagtctcgtgcc
aagtgtgatgtcgatgaaacagtttcttcagctgcactttctgaagaaactgaaaaacca
aagcttaaagctacaggccatgtattccaggcgctgcagtacttacgaaaactgtgcaac
catccagcattagttttaacacctcaacatccagaattcaagagtaccactgagaaactt
gcagttcagaattcttctctccatgatattcaacatgcccctaaactctcggctttgaaa
caattgctgttggactgtggtttgggaaatggcagcacttctgagagtggcacagagtca
attgtagcccagcacaggatactgatcttctgtcagctaaaaagcatgcttgacatagta
gaacatgatcttctcaaacctcacttaccctctgtcacttacttgagattagacggtagc
atacctcctggtcagaggcattccattgtttcacggtttaataatgatccatccatagat
gttctcttacttacaacacatgttggtggcctggggcttaacttaacaggcgctgacaca
gtggtatttgtggagcatgactggaatcccatgcgtgatctgcaagccatggaccgggcc
catcgcattgggcagaaacgtgtggttaatgtgtatcgactgataaccagaggaacgctg
gaagagaaaataatggggttgcagaaattcaagatgaacatagcgaatactgttattagc
caagagaattcgagtttgcagagtatggggacagatcaactccttgatctgtttactctt
gataaggatggcaaagcagaaaaagctgatacttctacttctggaaaagcgagtatgaaa
tcaattcttgaaaacctgagtgacctttgggatcaagagcaatacgattcagagtacagc
ctggaaaattttatgcattctctcaaataa
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integrated database retrieval system
