KEGG T01009: 100156513

Sus scrofa (pig): 100156513

Entry

100156513         CDS       T01009

Symbol

NCBP2

Name

(RefSeq) nuclear cap-binding protein subunit 2

K12883

nuclear cap-binding protein subunit 2

Organism

ssc Sus scrofa (pig)

Pathway

ssc03013

Nucleocytoplasmic transport

ssc03015

mRNA surveillance pathway

ssc03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:ssc00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100156513 (NCBP2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100156513 (NCBP2)
   03015 mRNA surveillance pathway
    100156513 (NCBP2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100156513 (NCBP2)
   03041 Spliceosome [BR:ssc03041]
    100156513 (NCBP2)
Messenger RNA biogenesis [BR:ssc03019]
Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     100156513 (NCBP2)
Spliceosome [BR:ssc03041]
Common components
  Common spliceosomal components
   Cap binding complex
    100156513 (NCBP2)

SSDB

Motif

Pfam:

RRM_1 RRM_occluded

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

Vega:

UniProt:

LinkDB

Position

13:133177209..133192935

AA seq 156 aa
MSGGLLKALRSDSYVELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELF
SKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK
EGRQYGRGRSGGQVRDEYRQDYDAGRGGYGKLAQNQ

NT seq 471 nt +upstreamnt +downstreamnt
atgtcgggtggcctgctgaaggcgctgcgcagcgactcctacgtcgaactgagccagtac
cgggaccagcacttccggggtgacaatgaagaacaggagaagttactgaagaaaagctgt
acattgtatgttggaaatctttccttttatacaactgaagaacaaatctatgaactcttc
agcaaaagtggtgacataaagaaaatcatcatgggcctggataaaatgaagaaaacagcg
tgtgggttttgctttgtggaatactattcaagagcagatgctgaaaatgccatgcggtac
ataaatggaactcgtctggatgaccgcatcattcgcacagactgggatgcaggctttaaa
gagggcaggcagtatggccgtggacgatctgggggccaggtacgagatgagtatcgacag
gactatgatgctgggagaggtggctatggaaaattggcccaaaaccagtga

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