Sus scrofa (pig): 100156574
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Entry
100156574 CDS
T01009
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100156574 (SAMD4A)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100156574 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
100156574
NCBI-ProteinID:
XP_020957891
Ensembl:
ENSSSCG00000023408
UniProt:
A0A4X1WDA4
A0A480YHQ7
LinkDB
All DBs
Position
1:183915337..184140122
Genome browser
AA seq
718 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICINAPNWQDKSLGCENGHVPLYSSSSVPTTINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGNLRTPLQELHQMILTPIKAYSS
PTTTPEARRREPQAPHPPSLMGPESQSPDCKDSATAAGATATASAGASGGLQPHQLSTCD
GELAVTPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKK
RLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVGSGMGRRNPRQYQ
IPARNVPSARLGLLGTSGFVSSTQRNTAANPTIMKQGRQNLWFANPGGSNSMPSRTHSSV
QRTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgctctgctgtcgctgctcaagcgcgtgagccagacccaggcccgtttc
ctccagctctgcctggagcactcgctggccgactgcgccgagctgcacgtcctcgaaggc
gaggccaacagtcccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcctgttaactcacctgcctttgctgaagccaggaaacctcgacgcaaaagtagag
tatatgaaactgctgcccaaaatcctggcgcactccattgaacacaaccagcacattgag
gagagccggcagctgctgtcctatgctttgatccacccagccacttcgttggaagaccgc
agtgctttggccatgtggctgaaccacttggaggaccgcacgtccaccagctttggtggc
cagaaccggggccgctcggactctgtggattatggacagacacactactatcaccaaaga
cagaactctgacgacaagctcaatgggtggcagaactctcgggattctgggatttgcatc
aatgcccccaactggcaggacaaaagcctggggtgtgagaatggccacgtgcccctctac
tcctcttcatccgtccccaccacaatcaacacgattggaaccagcacaagtacaattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcctggttgaaaagcctccgcctgcacaagtat
gccgcgctgttctcgcagatgacctatgaggagatgatggccctcactgagtgccagctg
gaggctcagaatgtcaccaaaggtgcaagacacaaaattgtcatcagtattcagaagctc
aaagagagacagaacctcctgaagtctttggaaagagacatcatcgaaggcggcaacctg
cgcaccccgctccaggagctgcaccagatgatcctgactcccatcaaggcctacagctcc
ccgaccaccactcccgaggctcgccgccgggagccccaggccccacacccgccttcgctc
atgggcccggagagccagagccctgactgcaaagacagtgccacggccgccggagccact
gccactgcctcggccggggccagcggcgggctccagccgcaccagctgagcacttgtgat
ggggagctggctgtcacccccctgccagagggggacctccccgggcagttcacacgtgtc
atggggaaagtgtgcacacagctcttggtctccagacccgatgaggaaaatataagttcc
tatttacagctcatagacaagtgtctaattcatgaggcatttacagagacacagaaaaaa
agattgttgtcatggaaacagcaggtgcagaagctctttcggtctttccctcggaaaacc
cttctagacatatcaggatatcgacagcaaagaaatcgtggctttggacagtccaactca
ctcccgacggccggctctgtgggcagtggcatgggcagacggaacccacgccagtaccag
atccctgcccggaatgtcccttccgcccgccttggcctcttgggcaccagtggcttcgtc
agctccacgcagcgcaacaccgcagccaaccccaccatcatgaaacaaggaagacagaac
ctctggttcgccaaccccgggggcagcaacagcatgccaagccgcacccacagctcagtc
caaaggacccgatcgctgcccgtgcacacttcgccacagaacatgctgatgttccagcag
ccagaattccagcttcccgtgactgaacctgatatcaacaacaggctggagtccttgtgc
ctcagtatgaccgagcacgccctgggagacggggttgaccggacctccacaatctag
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