Sus scrofa (pig): 100156733
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Entry
100156733 CDS
T01009
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X3
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100156733 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100156733 (CHD8)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100156733 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100156733
NCBI-ProteinID:
XP_003482311
Ensembl:
ENSSSCG00000002127
UniProt:
A0A4X1UY74
A0A8D0J4L3
LinkDB
All DBs
Position
7:77719476..77780148
Genome browser
AA seq
2583 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVGN
SSASDLVPPPEETTPTELPKESAAPAPESLTLHDYTTQPVSQEQPAQPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSSSAGGQPSQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSS
QPQPQQPPSTQPVALSSVQQAQIMGPGQGPGQRLSVPLKVVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASSTPHTGGKTGIEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTL
FQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEV
PTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSD
IVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP
PGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTR
REQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRL
PPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALCQPPGPEL
PKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAPAPSLSRC
STPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVARSRPTPQD
YEMRVAPSDTTPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESED
EKEEKLTADRSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRV
LINRIDLVCQAVLSGKWPSSRRSQEMVTGGMLGPGNHLLDSPSLTPGEYGDSPVPTPRSS
SAASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVMGDG
HPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRAELEM
WLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQTANSRNGKKGHHTE
TVFNRVLPGPIAPDSSKKRARRTRPDLSKMMALMQGGGTGSLSLHNTFQHSSSGLQSVSS
LGHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGLRATGYPSS
PATTTSGTALRLPPLQPEEDEDDEDEDDDDDLSQGYDSSERDFSLIDDPMMPANSDSSED
ADD
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagcttcaatcaagtcacgcaagatcctattgaggaagctcttggactgcca
agctctctggactccttggatcagatgaaccaggatggtggaggtggtgatgtggggaat
tcatcagcaagtgacttggtccccccaccagaggaaacaacccccacagaacttcccaaa
gaatcagcagctccagctccagaatctttaaccttgcatgattataccactcagcctgtc
agccaagagcagccagcccaacctgtcttacagacaccgacgccaacatcaggacttttg
caggtctccaagagccaggagatcttgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctcctccagtagtgctggagggcaaccatctcagtcagcccctaagattgtt
attcttaaggccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctcgtggcaggcacagccaatggtggaaaagtc
acttttaccaaagtgctaaccggcactccccttcgacctggtgtttccattgtctctggt
aatacagtgttggctgccaaggtccctgggaaccaggctactgttcagcgcattgtccag
cccagccgaccagtaaagcagctggttctacagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcaaaacgcatcacgctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcatgtcgtgctagggagtctaccaggcaagatagtgttacagggcaaccag
ctagcagccctgactcaagccaagaatgcccaggggcagcctgccaaagtagtaactatc
cagctgcaggtgcagcagccgcagcagaaaatccagattgtaccacagcctccatcatca
cagccacaaccccagcagccaccctcaacccagccagtggctctctcctctgtgcaacag
gctcagataatgggaccaggacagggcccaggacaaagactttcagtaccactcaaggtg
gtgctgcagccacaggccggctcttcccaaggggcatcttctgggctctctgtagttaaa
gttctaagtgccagtgaagtggcagctctgtcctcaccagcaagctctacccctcatact
gggggcaagacgggaattgaagaaaaccgtaggctggagcaccagaagaaacaagagaaa
gcaaatcggattgtagcagaggccattgctagggcccgtgctcggggtgaacagaatata
cctcgagtcctgaatgaggatgagttgcccagtgttcggcctgaggaggagggtgaaaag
aaacgcaggaagaagagcagtggggagaggctcaaagaagaaaagccaaagaagagcaaa
acatctggtacctccaaaaccaagggcaagagtaagctaaacaccatcactcctgtggtg
ggtaagaagagaaagcgtaatacctcatctgataattcagatgtggaagtcatgcctgca
caatcaccccgggaagatgaagaaagcagcattcagaagagacgttcaaaccgccaagtt
aagcggaaaaaatatacagaggacctggatataaagatcactgatgatgaagaagaagaa
gaagtagatgtaactggtccaatcaaaactgagcctatcctccctgagccagtgcaggaa
ccagatggcgagactttgccttccatgcaattctttgtggagaatcccagtgaagaagat
gcagccattgtagacaaagtgctttctatgcggattgtgaagaaggagcttccttctgga
caatatactgaagcagaagaattctttgtcaagtacaagaactactcctatctgcactgt
gaatgggctaccatctctcaactagagaaggataagaggatccatcaaaaactaaagcgc
ttcaaaaccaaaatggctcagatgagacacttcttccatgaggatgaagagcccttcaac
ccggattatgtagaggtggacaggatattggatgagtctcacagtattgacaaggacaat
ggggagcctgtaatttactacctggtgaaatggtgctctctgccttatgaggatagtaca
tgggagttaaaagaagacgttgatgaaggcaagattcgagaatttaaacggatccagtca
aggcacccagaactcaaaagggtgaatcgtccgcaggcaagtgcctggaagaagttggag
ttgtcacatgaatataaaaacagaaaccaattgcgggaatatcagttggaaggggtcaat
tggctgctctttaattggtataacaggcagaactgcatcctagctgatgagatgggattg
ggcaaaaccattcagtccattgccttcttgcaggaggtatataatgtgggcatccatggt
cccttcttggtcattgccccactgtccacaattactaactgggagcgagaattcaacaca
tggacagagatgaacactatcgtgtaccacggcagtctggccagtcggcagatgattcag
cagtatgaaatgtactgcaaagactcacgggggcgcctcatcccaggtgcatacaagttt
gatgccctaatcaccacttttgagatgattttgtcagactgtcctgaacttcgtgagatt
gaatggcgttgtgtcatcattgatgaggcccatcgactaaagaaccgtaattgcaagctg
cttgatagtctcaagcacatggacctggagcacaaagttctactcacagggacaccattg
caaaatactgtggaggaactgtttagcttgcttcatttcttggaaccttcacagtttcca
tcagaatcagaattcctcaaggactttggggatctcaagacagaggaacaggttcaaaag
ctacaagccatcctcaaaccaatgatgctgagaagacttaaagaggatgttgaaaaaaac
ctggcacccaaacaagaaactattattgaagtagagctgaccaacattcagaagaaatac
taccgggctattttggagaagaatttctcctttctttccaaaggggcaggtcatactaat
atgcctaatctactcaatacaatgatggagttgcgcaaatgctgcaaccacccatatctc
atcaatggtgcagaagaaaaaatcctaacagaatttcgagaagcttgccatatcatacct
catgacttccacttgcaggccatggttcgttcagctggcaaattggttcttattgacaag
ttacttcccaaacttaaagctggtggccataaggttctgatcttctcccagatggtacgc
tgcctagatatcctagaggattatcttatccaaaggaggtacttatatgagcgtattgat
ggacgagttagaggcaaccttcggcaggctgctattgatcgctttagtaagcctgactca
gaccgatttgtctttttgctatgcacccgggccggtggacttggcattaatctcacagct
gcagatacttgcattatctttgattcagactggaatccacaaaatgatctgcaggcccaa
gcacggtgtcatcgaattgggcagagcaaagctgtgaaggtgtaccgtctcatcactcgt
aattcttatgagagagagatgtttgataaggctagcctcaagttgggattggataaagct
gtacttcagtccatgagtggtcgggatggcaacattactggaatccagcagttttccaag
aaggagattgaagatctcttacgaaaaggagcgtatgcagccataatggaggaagatgat
gagggctccaagttttgtgaagaggacattgaccagatcttgctaagacgaaccactacc
atcaccattgaatctgaaggaaagggttctacctttgccaaggcaagctttgttgcttcg
gaaaatagaacagatatttctctggatgaccccaacttttggcaaaaatgggccaagaag
gctgacctggacatggatctacttaatagtaagaataacttggtgattgacacacctaga
gtacgaaaacagacccgccacttcagcactctgaaagatgatgacctagtggaattctct
gatttggaaagtgaagatgatgagcgaccacgctctcgccgacatgaccgtcatcatact
tatgggcgcactgactgctttcgggtggaaaagcacctcctggtgtatggttggggacgg
tggcgagatattctgtctcatggacgcttcaagcgacgtatgactgaaagagatgtggaa
acaatttgccgggccatcctcgtgtattgtctcctacactatcgtggggacgaaaatatc
aaaggcttcatttgggacttgattagccctgctgaaaatggcaagacaaaagaattgcag
aatcattcaggtctatctatccctgtgccccgtggacgcaaggggaaaaaagtaaagtca
caaagcacttttgatatccataaggcagactggatccggaaatataaccctgatactctg
ttccaagatgagagttataagaagcacttgaaacatcagtgtaacaaggtgctgttgcgg
gtacgaatgttatactatctgagacaggaggttattggagaccaggcagagaaggtgtta
ggtggtgccattgccagtgagattgacatatggttcccagtagtggatcagctggaggtt
ccaacaacatggtgggacagtgaggctgataagtccctgctcattggagtctttaagcat
ggctatgaaaaatataatactatgagggcagatccagccttatgcttcctagaaaaggct
ggccgaccagatgacaaagccattgcagcagaacatcgagtgctggataatttttctgac
atagtagaaggggttgactttgataaagattgtgaagatcctgaatataaaccactccag
ggtcccccaaaggaccaagatgatgagggtgatcccttgatgatgatggatgaggagatc
tcagtgattgatggagatgaagcccaggtgacccaacagccaggccatctattctggcct
ccaggctctgctttgacagctaggcttcggcgcctagtgacagcctatcaacgcagctac
aaaagagaacagatgaagatagaggctgcagaacggggggatcggaggaggcgtcgttgt
gaggcagccttcaagctaaaagaaattgcacggcgggagaaacagcaacgatggacaagg
cgtgaacaaactgatttctatcgagtagtttctacctttggtgtggagtatgaccctgac
acgatgcagttccattgggatcgcttccgcacttttgcccgactggacaaaaaaacagat
gaaagccttaccaagtattttcatggctttgtggccatgtgccgccaagtgtgccgcctt
cccccagcagctggagacgaacctccagaccctaatctgttcattgagcccatcactgag
gaaagggcctcaaggacactctaccgtattgaattgcttcggcgcttacgggaacaagtt
ttgtgccaccctcttttggaagatcggctggcattatgtcagcctccaggtcctgaattg
cccaaatggtgggagcctgttcggcatgatggggagcttctacgaggggcagcccgccac
ggggtgagccaaacagactgcaacatcatgcaggacccagacttctcttttctggctgcc
cgtatgaattatatgcagaaccatcaggcaggagcaccagctccatccctgtcacgctgc
tctactccactgctacaccagcagtatacctcacgcactgcctcaccactgcccctgcgc
ccagatgctcctgttgaaaagccacctgaggagacagctgcccaggtgcccagtctggag
agtctgactttaaagctagagcatgaggtggtggccaggagccgaccaaccccacaagac
tatgagatgcgagtagccccctctgatactacccctctggtttcccggagtgttccacca
gtcaaactggaggatgaggatgattcagactctgagctggacttgagcaagctgtcacca
tcatcctcttcttcctcatcctcatccagctccagctccagcactgatgagagtgaggac
gagaaggaagagaagctaactgctgaccggtcccgctcaaaactctatgatgaagagagt
ctcctgtccctcactatgtcccaagatggattcccaaatgaagatggagaacaaatgacc
cctgaacttctgctgctacaagaaagacagagagcctctgagtggcccaaggatcgtgtc
ctgataaaccgtattgacctcgtctgccaggctgtactctcagggaagtggccttctagc
cgcaggagccaagaaatggtaacaggaggaatgctggggccaggcaaccacttgctagac
agtccttccttgactccaggagaatatggtgattctccagtccccacaccacgaagtagc
agtgcagcttccatggcagaggaggaagtgtctgcagtcaccacagcagcagctcagttc
accaaacttcgccgaggcatggatgagaaggagtttacggttcagatcaaagatgaggaa
ggattgaagttaacattccagaagcacaagttgatggctaatggagtaatgggagatgga
catcctctttttcataagaagaaagggaacagaaagaagctagttgagctggaggtggaa
tgcatggaagagcctaatcaccttgatgtggacctggagacccggatccctgtcatcaat
aaggtggatggtactttgctggtgggtgaggatgcccctcgccgggctgaactggagatg
tggttacagggtcatccagagttcgctgtcgatccccgatttctagcgtatatggaggat
cgcagaaaacagaaatggcagagatgtaaaaaaaataataaggcagaattgaactgtttg
ggaatggaaccagtacagacagctaactctaggaatgggaaaaagggtcatcatactgaa
actgtgttcaaccgggttttgccagggcctattgcaccagacagcagcaagaagcgggcc
cgtaggacacgacccgacctttctaagatgatggccctgatgcagggtggaggcactggg
tccctgtctctgcataataccttccagcacagcagtagtggcctgcagtctgtgtcatct
ctgggtcacagcagtgccacttctgcatctttgccttttatgccgtttgtgatgggtggt
gcagcatcatcccctcatgtagactccagcaccatgcttcatcaccaccaccaccacccc
caccctcaccatcaccaccatcaccatccaggcctgagagccactggctacccttcttca
ccagccactaccacctctggtactgccttgaggttgccaccactgcagcctgaggaagat
gaggacgatgaggatgaagatgatgatgatgatttatctcagggctatgatagctcagaa
agggacttctcactcattgatgatcctatgatgccagccaactcagactccagcgaagat
gctgatgactga
DBGET
integrated database retrieval system
