Sus scrofa (pig): 100156795
Help
Entry
100156795 CDS
T01009
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100156795 (PDZRN4)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100156795 (PDZRN4)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100156795 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
Sina_ZnF
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
100156795
NCBI-ProteinID:
XP_003481759
Ensembl:
ENSSSCG00000000791
UniProt:
A0A5G2QNA9
LinkDB
All DBs
Position
5:72574370..72940883
Genome browser
AA seq
1042 aa
AA seq
DB search
MGFALERFIEAVDPDFQCRLCGQVLEEPLCTPCGHVFCARCLRPWAARWRRCPLQCQPLA
PGELYRVLPLRSLVQKLRIQCDYRARGCGRSVRLRELAAHVERCDFGPGHRRRRRRRGCI
SEPRCLGGGNVPARGSCGSAPGVRRGGGGGARRGPPGIRGGSGRGPGSRVLAWRRREKAL
LVQLWALQGEVQLTARRYQEKFTQYMAHVRNFARDLGGGHGRDGEHKPFTIVLERENDTL
GFNIIGGRPNQNNQEETSMEGIYVSKISQNGPADRADGLEIHDKIIEVNGKDLSKATHEE
AVEAFRNAKEPIVVQVLRRTQLNKPAYGTAPEVQLMNASTQTDITFEHIMALAKLRPPTP
PVPDICPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKL
GLTVCYRTDDEEDSGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQDREAAVALLSSD
ECRRIVLLVARPESQLDEGWLEDERNEFLEELNLGMLEEQHNEAMQRAANEVEQPKKQEE
EEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENTAEAPKGTSLKSKRELGQSQDT
LGSVELQYNESFVSGEYIDSDCTGNQDEECERFRQLLELKCKIRKHEEYDLYYSSRTVGC
NHGGQEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSI
DTQRGKLDDILEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRS
TMAAHQSSSGLSSKESTSTKAKTTEQGCSIEGKEKPSEGSKLSDQDPTGGEHVPYLSPYH
SSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKVR
SDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSREERKQHLVRAK
EQRRRREFMMRSRLECLKESPQSGSEGKKEVSIIELSHKKMMKKRNKKILDNWMTIQELM
THGAKSPDGTRVPNAFLSVTTV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgtttcatcgaagcggtggacccggatttccagtgcaggctg
tgcggccaggtgctggaggagcccctgtgcacgccatgcgggcacgtcttctgcgcccgc
tgcctgcggccctgggctgcgcggtggcgccggtgcccgctgcagtgccagcccctggct
ccgggtgaactgtaccgagtgctgcctctgcgcagcctcgtccagaagcttcgcatccag
tgcgactaccgcgcccggggctgcggccgctcggtcaggctccgcgagctggctgcgcac
gtcgagcgctgcgacttcggccctggccaccgccgccgccgccgccgccggggctgcatc
tcggaaccccgctgcctgggtggcgggaacgtacccgcgagggggagctgcggctcggcg
cccggggtccgccggggcgggggcgggggcgcccgcagggggccgcccggcatccgcggc
gggagcgggcgggggcctgggtctcgggtcctggcctggaggcggcgcgagaaggcgctg
ctagtgcagctctgggcgttgcagggcgaggtgcagctcacggcccgcaggtaccaggag
aaattcacccagtacatggctcacgtccgcaacttcgccagagacttgggcggcggccac
ggccgggatggagaacataagccattcactattgtgttagaaagagaaaatgacactttg
ggattcaatattataggcggtcgaccaaatcagaataatcaagaagaaacatcaatggaa
ggaatttatgtttcaaaaatttcgcaaaatggacctgctgatagagcagatggcctggag
attcatgacaaaatcattgaggtcaatgggaaggatctctccaaggccacccatgaagag
gcagtggaagcttttcgaaatgccaaggagcccatcgtggtccaggtgctgaggcgaaca
cagctcaacaaaccagcctatggaacggccccagaagtgcagcttatgaatgccagcact
cagacagacatcaccttcgaacacatcatggccctggccaaactcaggccacccacccct
ccagtgcctgacatctgtccctttctgctctcagacagctgccattctcttcatccgatg
gaacatgaattttatgaggacaatgagtatctttccagcttgcctgctgatgcagacaga
acagaggacttcgaatatgaggaggtcgagctgtgtcgagttagcagtcaggagaagctg
ggcctgacagtctgttaccgaacggatgatgaagaagactccggcatttatgtcagcgag
gtagatccaaacagcatcgctgccaaagatggccggattcgagaaggggatcgtattttg
caaataaatggggaagacgtccaggatcgagaggcagcagtggcactgctgtcgagcgat
gagtgtaggagaatcgtgctgctggttgcaaggccggagagtcagctggatgaaggctgg
ctggaagatgaaaggaatgaattcttagaggagttaaacttagggatgttggaagaacag
cataatgaagcaatgcagcgtgcggccaatgaggtggagcagccaaaaaaacaagaggaa
gaagaaggtacaacagacacagcaacatcctcatctaacaaccacgagaaggacagtgga
gtggggcgcacagacgaaagcttgaggaacgacgagagctcggagcaggagaacacagct
gaggctcccaagggcacatctctgaagagcaagagggagctggggcagagccaagacact
ctcggaagcgttgaacttcagtacaatgagagcttcgtgtctggtgaatacattgattca
gactgtactggcaaccaagatgaggagtgcgaaagatttcggcaactcttggagctcaaa
tgcaagattcggaagcatgaagagtatgacctgtattactcaagccgcacagtaggctgc
aatcatgggggacaggagggcgtggagcacgaactgcagttgctgaatgaagaactcaga
aacattgaactggagtgccagaatatcatgcaggctcacaggctccagaaggtgacagac
cagtatggagacatctgggccctgcatgacggaggattccgaaactataacaccagcata
gatacgcaaagaggcaaactagatgacatccttgaacacccagaaaagtcagacaaagac
agttccagcgcctacaacactgccgaaagctgcaggagcacgccactcactgtggaccgt
tcccctgacagttcccttccaagaatgatcaacctcaccaataagaaaaacctgagaagc
acaatggctgcccatcagtcctcttccggactgagcagtaaagagtcgacttccaccaaa
gccaaaaccacggagcaaggctgcagcattgagggcaaggagaagccttcagaaggcagc
aagctctccgatcaagatccgactggcggtgaacatgtcccttacctctctccctaccac
agctcctcctacagatacgcaaacatcccagcacacgcccggcattatcaaagctacatg
cagttaattcagcagaagtctgccgtcgagtacgcgcagagtcagctcagcctagtgagc
atgtgcaaggagtctcagaagtgctccgagcccaagatggaatggaaggtcaaagtccgg
agcgacgggacgcggtacatcaccaagagacccgtgcgggaccgcattctgaaggagcgt
gccttaaagatcaaggaggagcggagtggcatgacgacggatgatgacaccatgagcgag
atgaaaatggggcgctactggagccgcgaggagaggaagcaacacctggtgcgggccaaa
gagcagcggcgccgccgagagttcatgatgcggagccgcttggagtgtctcaaggagagt
ccccagagcggcagcgagggcaagaaagaggtcagcatcattgaactgagtcacaaaaag
atgatgaagaagagaaacaagaaaattttggacaactggatgacaatccaagaactgatg
acccacggggccaagtcccctgatggcacacgggttcctaatgcctttttgtcagtcacc
actgtatga
DBGET
integrated database retrieval system
