Sus scrofa (pig): 100156847
Help
Entry
100156847 CDS
T01009
Symbol
SIX1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100156847 (SIX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100156847 (SIX1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100156847 (SIX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
100156847
NCBI-ProteinID:
NP_001186647
Ensembl:
ENSSSCG00000005087
UniProt:
A0A4X1WCT7
E5DCJ4
LinkDB
All DBs
Position
1:complement(189620430..189624652)
Genome browser
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
ARSSNYSLPGLTASQPTHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccatcgttcggcttcacacaggagcaagtggcttgcgtgtgcgaggtt
ctgcaacaaggtgggaacctggagcgcctgggcaggttcctgtggtcgctgccagcctgc
gaccacctgcacaagaacgaaagtgtgctcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgcgagctttacaagatcctggagagccaccagttctcgcctcacaaccac
cccaagctgcaacaactgtggctgaaggcgcactacgtggaggctgagaagttgcgcggt
cggcccctgggcgcggtgggcaaatatcgggtgcgccgaaaattcccgttgccgcgcact
atctgggacggcgaagagaccagctactgcttcaaggagaagtcgcggggcgtgttgcgg
gagtggtacgcccataacccctacccctcgccgcgtgagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggttcaagaaccgaaggcaacgagaccgg
gccgccgaggccaaggaaagggagaacaccgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggaaagccgctcatgtccagctcagaagaagaattc
tcacctccccaaagtccagaccagaactcggtccttctgctgcagggcaatatgggccac
gccaggagctcaaactattccctcccgggtttaacggcctcgcagcccacccacggcctg
caagcccaccagcatcagctccaggactccctgctgggccccctcacctccagtctggtg
gacttagggtcctaa
DBGET
integrated database retrieval system