Sus scrofa (pig): 100156869
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Entry
100156869 CDS
T01009
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100156869 (CHD2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100156869 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
100156869
NCBI-ProteinID:
XP_001926393
Ensembl:
ENSSSCG00000002266
UniProt:
A0A8D0MD56
A0A287A4M4
LinkDB
All DBs
Position
7:complement(85980759..86107886)
Genome browser
AA seq
1828 aa
AA seq
DB search
MMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGTSAESEPEQKKVKARRP
VPRRTVPKPRVKKQPKTQRGKRKKQDSSDDDDEDDEAPKRQTRRRAAKNVSYKEDDDFET
DSDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDSEK
DEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDV
EYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGL
PYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGE
NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVV
PLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILL
KDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL
HFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVE
MSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQ
EILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGS
IKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR
AHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNS
NPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQ
FKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKA
QTNDSDSDTESKRQAQRSSASESETDESDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFI
KAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGK
GPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVE
WGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKL
LRKSLEKEGAVTGGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEGEVKD
DGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPKGGDAKSSSKSKR
SQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLE
HTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRS
QEEEEQKKKDDAIGGKKPFRPEASGSSRDSLMSQSHTPHNLHPQKPHLPASHGPQMHGHP
RDNYNHPNKRHFSNADRGDWQRERKFNYGGGNNNPPWGSDRHHQYEQHWYKDHHYGDRRH
MDAHRSGSYRPNNLSRKRPYDQYSSDRDHRGHRDYYDRHHHDSKRRRSDEFRPQNYHQQD
FRRMSDHRPPMGYHGQGPSDHHRSFHTDKLGEYKQPLPPLHPAVSDPRSPPSQKSPHDSK
SPLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaagaggaggacagttcgctacacagcaatgcatcg
agtcattcagcatctgaagaagcttcgggttcagactcaggcagccagtcggagagtgag
cagggcagcgatccaggaagtggacatggcagcgagtcaaatagtagttctgaatcttcg
gagagtcagtcggaatctgaaagtgaatcagcaggttccaaatcccagccagttcttcca
gaagccaaagagaagccagcctctaagaaggaacggatagctgatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggcggtcaaaccgaagcagacaagaaccatca
cgatttaatattaaggaggaggcaagtagcgggtctgagagtgggagcccaaaaagaaga
ggccagaggcagctgaaaaaacaagaaaaatggaaacgggagccctcagaagatgaacag
gaacaaggcaccagtgcagaaagtgaaccagagcaaaaaaaagtgaaagccagaagacct
gtccccagaagaacagtgcccaaacctcgtgtgaaaaagcaacctaagactcaacgtgga
aagaggaaaaaacaagattcttctgatgatgatgatgaagatgatgaagctcccaaaagg
cagactcgccgcagagcggctaaaaatgttagttacaaagaagacgatgactttgagact
gactcagatgacctcattgaaatgaccggagaaggagttgatgaacaacaggataatagt
gaaactattgaaaaggtcttagattcaaggctgggaaagaaaggagccactggagcttct
actactgtatatgcaattgaagctaatggagaccctagtggcgactttgactctgaaaag
gatgaaggtgaagttcagtacctcatcaagtggaaaggctggtcatatatccacagcacg
tgggagagtgaagagtccttacagcaacagaaagtgaagggtctaaaaaaactagagaac
ttcaagaagaaagaggacgaaatcaagcagtggttagggaaagtttctcctgaagatgtg
gaatatttcaactgccaacaagagctggcctcggagctgaataaacagtatcagatagtg
gaaagagtaatagctgtgaagacaagcaaatctacattgggtcagacagattttccagct
cacagtcggaagccggcaccatcaaatgaacctgagtatctatgcaaatggatgggactg
ccctattcagagtgcagctgggaagatgaagccttgattggaaagaaattccagagctgc
attgacagcttccatagtcggaataattcaaaaaccatcccaacaagagaatgcaaggct
ctgaagcagagaccacgatttgtggctttaaagaaacagccagcatatttaggaggagag
aatctggagctccgagattatcagctagaaggtctcaactggcttgctcactcctggtgc
aaaagtaacagtgtaatccttgctgatgaaatgggcctaggaaagaccatccagaccata
tcattcctctcctacctgttccaccaacaccagctgtatggcccctttcttatagtcgtc
cctttatccaccctcacctcatggcagagggagtttgaaatctgggcaccagagattaac
gtagtggtttacataggtgacctgatgagcagaaatacgatacgagaatatgaatggatt
cactctcagaccaaacggctgaagttcaatgcacttataacaacatatgagattctctta
aaagataagactgtgctgggcagtattaactgggcctttctgggagtggatgaagcccat
cggttgaagaatgatgactctttattgtataaaactctgattgatttcaagtccaaccat
aggctcctgattacggggacccctcttcagaattccctcaaagagctctggtccttgctg
cactttattatgccggagaagtttgagttctgggaagattttgaagaagaccatgggaaa
gggcgcgagaatggctatcagagtcttcataaggtgctagaacctttccttctccgaaga
gtgaaaaaagatgtggagaaatcccttcctgccaaagtcgaacagattctcagggtggag
atgtcggcccttcagaagcagtattacaaatggattctaaccagaaattacaaggctctt
gccaaaggaacaagaggcagtacatctggttttcttaatattgtgatggaattgaaaaaa
tgttgcaaccactgttatctgattaaaccccctgaagaaaatgaaagggaaaatggacag
gagattcttctgtccctgatcaggagcagcgggaagctgattctattagataaactgttg
acaagacttcgagaaaggggaaacagagtccttatcttctctcagatggtgagaatgttg
gatatcctggctgagtacctgactattaagcactatcctttccagcgtctggatggttcc
atcaagggagaaatccgaaaacaggcattggaccacttcaatgcagatgggtctgaggac
ttctgtttcctgctctcgacaagggctggtggcctgggaatcaatttggcttcagcggac
acagtcgtcatctttgactctgactggaacccccagaacgacttgcaggcacaagcccga
gcccatagaattggtcagaagaagcaggtaaatatttaccgcctcgttacaaaggggact
gtggaagaagagatcatagaacgggccaaaaagaagatggtattggaccatctggtgatt
cagcgcatggataccactggccggacagttctggaaaacaactcaggaaggtccaattca
aatccttttaataaagaagagctgacagctattttgaaatttggagcagaagatctcttc
aaagaacttgaaggggaggaatcagagcctcaggaaatggatatagacgaaattttgcgc
ttggctgaaaccagagagaatgaagtctcaacaagtgcaacagatgagcttctgtcacaa
tttaaggttgccaactttgccacgatggaggacgaggaggagctagaagagcgtcctcac
aaggactgggatgagatcattccagaggagcaaaggaaaaaagtagaggaggaagagcgg
cagaaggagctggaggaaatttatatgttgcctcgaattcggagttccactaaaaaggct
cagacaaatgacagtgattctgatactgagtctaagaggcaggcccagagatcctctgcc
tctgagagtgagacggatgagtctgatgatgacaagaagcccaagcgcagagggcgcccc
cgaagtgtgcggaaggacctcgtggagggattcacagacgctgagatccggaggttcatc
aaggcatataagaagtttggtctccctcttgaacggctggagtgcatagcacgtgacgct
gagctggtagataagtctgtggcagatctgaagcgcctgggggagttgattcacaacagc
tgtgtgtcagcaatgcaggaatatgaagagcagctgaaagaaaatgccagcgaggggaaa
ggaccagggaaaaagagaggcccaacaatcaagatatctggggttcaggttaatgtgaaa
tctattatccagcatgaagaggagtttgagatgctgcataaatctatccctgtagaccct
gaagaaaaaaaaaagtactgcttaacctgtcgtgtcaaagctgcacatttcgatgtggag
tggggagtggaggatgattctcgcctgttgctgggaatttatgaacatggctatggaaac
tgggagctaattaaaacggatccagagctgaagttaactgacaaaattctgcctgtggag
acagacaaaaagccccagggaaagcagctgcagacccgagcggactatttgctgaagctt
ctcaggaagagtctggagaaggagggggccgtgacaggcggggaagaggccaaattaaag
aagcggaagcctcgagtaaagaaggaaaacaaagcacccaggctgaaagatgagcatggg
attgagttttcatctcctcgacactcagataatccatcagaagagggagaagtaaaggat
gatggcttagaaaagagtccgatgaaaaagaaacagaagaagaaagagaacaaggagaac
aaggagaaacagatgagttctaggaaagacaaggaaggggacaaggaaaggaagaagtca
aaagataagaaggaaaagcctaaaggtggtgatgccaaatcttcaagtaaatcaaagcga
tctcagggtcctgtccacatcacagcaggaagtgaacctgtccccattggagaggatgag
gatgatgatctggaccaggagacattcagcatatgtaaggagaggatgaggcctgtgaaa
aaggcactgaaacagctggataagcctgacaaggggctcaatgtgcaagaacagctggag
cacacccggaactgcctgctgaaaattggagaccggatagccgagtgccttaaagcttac
tcagaccaggagcacatcaaactgtggaggaggaacctatggatttttgtttccaagttt
acagaatttgatgctcgaaaattgcataagttatacaagatggcccacaagaaaagatct
caagaagaggaggagcaaaagaagaaagatgatgcgattggtggtaagaaaccatttcga
ccagaggcctcaggttcaagtcgggattccctgatgtctcagtctcacaccccacacaac
cttcaccctcagaagcctcatttgcctgcctctcatggcccacagatgcatggacaccca
agagataactacaatcaccccaacaagagacacttcagtaatgcagatcgaggcgactgg
cagagggaaagaaagttcaactatggtggtggcaataacaatccgccctggggcagtgac
aggcaccatcagtacgaacagcactggtacaaggaccaccattatggggaccggagacac
atggatgcccaccgttcagggagctatcgacccaacaacttgtctagaaagagaccttat
gaccagtacagcagtgaccgcgaccaccggggacacagagattattatgacaggcaccat
cacgactccaagcggaggcgatctgatgaattcaggccccaaaattaccaccagcaggat
ttccgacggatgtctgatcaccgccctcctatgggctaccatggccagggaccctcagac
catcaccgctctttccacacagacaaactgggggagtataaacagcccctgccccccctg
catcccgcagtctcagatcctcgatcgcccccttctcagaaatctcctcacgattccaag
tcacccctggatcataggtctcctttggagagatcactagaacagaaaaacaacccagat
tataactggaatgttaggaaaacataa
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integrated database retrieval system
