Sus scrofa (pig): 100156939
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Entry
100156939 CDS
T01009
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100156939 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100156939 (COPB2)
Membrane trafficking [BR:
ssc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100156939 (COPB2)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100156939 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100156939
NCBI-ProteinID:
XP_005669941
Ensembl:
ENSSSCG00000011662
UniProt:
A0A4X1TS96
F1SL54
LinkDB
All DBs
Position
13:complement(80220460..80264808)
Genome browser
AA seq
906 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRSAAQQELAGKPASPTPVIMATHTGNKEEKSLLELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgactcgatatcaagagaaagctaactgctcgatccgatagagttaagagt
gtggatttgcatcctacagagccatggatgttggcgagtctttacaatggcagtgtgtgt
gtttggaatcatgaaacacagacactggtgaaaacattcgaagtatgtgatcttcctgtt
cgagccgcaaagtttgttgcaaggaagaattgggttgtgacaggagcggatgacatgcaa
attagagtgttcaactacaacactctggagagagttcatatgtttgaagcgcattcagac
tacattcgatgtattgccgttcatccaacccagcctttcattctaactagcagtgatgac
atgcttattaaactctgggactgggataaaaaatggtcttgctcacaagtgtttgaagga
cacacccattatgttatgcagattgtgatcaaccccaaagataacaaccagtttgccagc
gcttctttggacaggactatcaaggtgtggcagctgggctcctcatcaccaaacttcact
ctggagggacatgagaaaggcgtgaattgcatcgattactacagtggtggcgacaagcca
tacctcatttcaggtgcagatgaccgtcttgtgaaaatatgggactatcagaataaaaca
tgtgtgcaaacgctggaggggcacgcccaaaacgtgtcttgtgccagttttcatcctgag
ctgccaatcatcatcacaggttcagaggatggaactgtgcgaatttggcattcaagcacc
tatcgcctcgagagtaccttgaattatggaatggagagggtgtggtgtgtggccagtctg
agagggtccaacaacgttgctttgggctatgatgaagggagcatcattgttaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatttgggccaaacattca
gaggtccagcaggccaacctaaaagcaatgggagatgctgaaattaaagatggagaaaga
ttgccactggcagtaaaggatatgggcagttgtgaaatataccctcagactattcagcac
aatcctaatgggcggtttgttgtggtgtgtggtgatggcgagtatatcatctatacggca
atggccttaagaaacaagagctttgggtctgcccaggagtttgcgtgggcccacgattct
tcagaatatgcgatcagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcttactggga
gtgagatctgtcaatggcttagctttctacgattgggacaatacagagctcatacgcagg
attgaaattcagcccaaacacattttctggtctgactctggagagctagtctgtattgct
actgaggaatcattttttatccttaagtatctgtcggagaaagtcttggctgcacaggaa
acacacgagggggttactgaagatggcattgaagatggctttgaggttcttggtgagatt
caggaaattgtgaaaacagggctgtgggtaggcgactgcttcatatacacaagttctgtg
aacagattaaattattatgttggaggagaaatagtcaccattgcccacttggacaggaca
atgtatctcctgggctatattcctaaagacaacaggctttatttgggggataaggaacta
aatatcgttagctactccctgctggtttcagtgctggaataccagacggctgtcatgcgg
agggacttcagcatggctgacaaggtcctcccgaccatcccaaaagagcagaggaccaga
gttgcacactttttggaaaagcagggcttcaagcagcaagctcttacagtatccacagat
cctgagcatcgctttgaacttgctcttcagcttggagaactaaaaattgcataccagctg
gccgtggaagcagagtcagaacagaagtggaaacaacttgctgaacttgccatcagtaaa
tgccagtttggcctggcccaggagtgcctgcaccatgcacaggactatgggggtctgttg
cttttggccactgcctctggaaatgctagcatggtgaacaagctagcagagggtgcagag
cgagacggcaagaataatgtggcattcatgagctactttttacagggcaagcttgatgct
tgcctggagctcttgattagaactggacgactgccagaagctgccttcttggcacggact
tacttacccagtcaggtttcaagggtggtgaaactctggagagaaaatctctcaaaagtc
aatcagaaagcagccgaatcccttgctgatccaacagaatatgaaaacctctttcctgga
ttaaaagaagcctttgttgtggaagaatgggtgaaggaaacacatgctgacctgtggccg
gccaaacaatacccactggtcacgccaaatgaagaaagaaatgttatggaagaggcaaaa
ggcttccagccgtcaagatctgcagctcagcaggaacttgctgggaaacctgcttctcct
actcctgttattatggccacccacacaggcaacaaagaagaaaagagtttacttgaactg
gaagtagatttggataatttggaattagaagacattgacacaacagatatcaacctggat
gaagatattttggatgattga
DBGET
integrated database retrieval system
