Sus scrofa (pig): 100157224
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Entry
100157224 CDS
T01009
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100157224 (PUS1)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100157224 (PUS1)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100157224 (PUS1)
Prokaryotic type
100157224 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100157224
NCBI-ProteinID:
XP_001928625
Ensembl:
ENSSSCG00000009741
UniProt:
F1RFR2
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Position
14:complement(23400575..23418470)
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AA seq
400 aa
AA seq
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MAGNGEAPVPVGTGQEQDKKARSGWQGAARIWEETEQQAKKLKSSEDGEQRRKLPKRKIV
LLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRCARTDK
GVSAAGQVVSLKVWLIDDILEKINSHLPSHIRILGLKRVTGGFNSKNKCDARTYFYMLPT
FAFAHKDHDVQDETYRLSTETLQRVNRLLACYKGTHNFHNFTSQKGPREPSARRYILDMF
CEEPFVREGMEFAVIKVKGQSFMTHQIRKMVGLVVAIIKGYAPESVLERSWGEAKVDVPK
APGLGLVLERVHFEKYNQRFGHDGVHEPLDWAREEAEVMAFKEQHIYPTIISTERHEKSM
AQWLSTLPMHNFSATAQEAAGLGSKDPNPLEGSEGDGDSD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaatggggaggccccggtgccagtggggactgggcaggaacaggacaagaag
gcccggagtggctggcagggtgctgccaggatctgggaggaaacagaacagcaggcaaaa
aagctcaagagcagcgaggatggggagcagcgcaggaagctgcccaagcggaagattgtt
ctgctcatggcctattccgggaagggctaccatggcatgcagaggaatgttgggtcctca
caattcaagaccattgaagatgacctggtgtccgccctggtccggtcgggttgtattcct
gagaatcacggggaagacatgaggaaaatgtccttccagcgctgcgccaggactgacaag
ggtgtgtctgcggctggccaggtcgtgtccctgaaggtgtggctgattgatgacatttta
gaaaagatcaacagtcaccttccttctcacattcggatcctgggactgaagagggtcaca
ggcggcttcaactctaagaacaagtgcgatgccaggacctacttctacatgctgcccacg
ttcgctttcgcccacaaggaccatgatgtgcaggacgagacgtaccggctgagcacagag
acgctgcagcgtgtgaaccggctccttgcctgctataagggcacccacaacttccataac
ttcacctcacagaaggggccacgggagcccagtgcccggcgctacatcctcgacatgttc
tgcgaggagcccttcgtgcgtgagggcatggagttcgcagtgatcaaggtcaagggccag
agcttcatgacgcatcagatccggaagatggtgggcctggtggtggccatcatcaagggc
tacgcgcccgagagcgtgctggagcgcagctggggggaggcgaaggtggacgtgcccaag
gcgccagggcttggcctggtcctggagagggtgcacttcgagaagtacaaccagcgcttc
ggccacgatggggtacacgagccactggactgggcacgggaggaggcggaggtcatggcc
ttcaaggagcagcacatctaccccacgatcattagcaccgagcgccacgagaagtccatg
gcccagtggctgagcaccctgcccatgcacaacttcagcgccaccgcccaggaggcggct
ggcctgggctccaaggaccccaaccccttggaaggcagtgaaggggatggtgatagtgac
tga
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