Sus scrofa (pig): 100157236
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Entry
100157236 CDS
T01009
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100157236 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100157236 (EXOSC8)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100157236 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100157236
NCBI-ProteinID:
XP_020920923
UniProt:
A0A8D1RHP4
F1RSQ6
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All DBs
Position
11:12817081..12825847
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AA seq
276 aa
AA seq
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MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSSLVKLGNTTVIC
GIKAEFGAPPTDAPDKGYIVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVNINEETALAEVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVFKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggttcaaaactgtggaacctctggagtattacaggagatttttaaaagag
aactgccgacctgatggaagagaacttggtgaattcagaaccacaactgtcaatgtaggt
tcaattggtactgcagatggttcttctttagtgaagctgggaaatactacagtaatttgt
ggaattaaagcagaatttggagcgccaccaacagatgctcctgataaaggatatattgtt
cctaatgtggatctatcacctctgtgttcctggagatttcggtctggccctccgggagaa
gaggcccaagtggccagccagttcattgcagatgtcattgaaaattcacagataattcag
aaagaggacttatgcatttctccaggaaagctagcttgggttctatattgtgatctcatt
tgcctcaaccacgatggaaacattttggatgcctgtacatttgctttgttagcagcttta
aaaaatgtacagttgcctgaagttaatataaatgaagaaactgctttagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcacccagttgcaacttcatttgctgtg
tttgatgatactctgcttatagttgatcctactgaagaggaggaacatctggccaccgga
accttaacagtagtaatggatgaggaaggcaagctatgctgtcttcacaaaccaggtgga
agtggactgactggagctaaacttcaggactgtatgagccgagcagttacaagacataaa
gaagtaaaaaaactgatggatgaagtatttaagagtatgaaacccaaataa
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