Sus scrofa (pig): 100157280
Help
Entry
100157280 CDS
T01009
Symbol
SNX25
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-25
KO
K17887
sorting nexin-25
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100157280 (SNX25)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100157280 (SNX25)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
100157280 (SNX25)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100157280 (SNX25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nexin_C
RGS
PXA
PX
Isy1
End3
Motif
Other DBs
NCBI-GeneID:
100157280
NCBI-ProteinID:
XP_013839503
Ensembl:
ENSSSCG00000015789
LinkDB
All DBs
Position
15:46306967..46388404
Genome browser
AA seq
893 aa
AA seq
DB search
MSTVQGAAASRNDERRAPSSSSVPPPPSPQHPPQVKLNPMPVGKDMFTESSSSTVKQEKY
LFDYSYRDYILXWYGSLSRDEGQLYHLLSEDFWEIARQLRHRLSHVDVVKVVCSDVVRAL
LTHFCDLKAANARHEEQPRPFVLHACLRNSDDEVRFLQTCSRVLVFCLLPSKDVQSLSLR
IMLAEILTTKVLKPVVELLSNPDYINQMLLAQLEHREQMNEHHKRAYTYAPSYEEFIKLI
NSNSDVEFLKQLRYQIVVEIIQATTISTFPQLKRHKGKETAAMKADLLRARNMKRYINQL
TVAKKQCEKRIRNLGGPSYDQQEDGALDEGEGPQSQKILQFDDILASTFYREHFRNYMER
MDKRALISFWESVEYLKNANKSEIPQLVGEIYQNFFVESKEISVEKSLYKEIQQCLVGNK
GIDVFCKIQGDVYETLKDRYYPSFIVSDLYEKLMMKEEEKLASQLTSNKDEMGPGGEAGE
EAVDEGSSRINEQASFAVNKLRELNEKLEYKRQALNSIQNAPKPDKKIVSKLKEEIILIE
KERTDLQLHMARTDWWCENLGMWKASITSGEVTEENGEQMPCYFVTVSLQEVGGVETKNW
TVPRRLSEFQNLHRKLSECFPSLKKVQLPSLSKLPFKSIDQKFMEKSKNQLNKFLQNLLS
DERLCQSEALYAFLSPSPDYLKVIDVQGKKSTFSLSSFLERLPRDFFSHQEEEIEEDSDL
SDYGDDVDGRKDALAEPCFMLIGEIFELRGMFKWVRRTLIALVQVTFGRTINKQIRDTVN
WIFSEQMLVYYISLFRDAFWPNGKLAPPTTIRSKEQSQETKQRARQKLLENIPDMLQSLV
GQQNARHGIIKIFNALQETRANKHLLYVLMELLLIELCPELRTHLDQLRAGQV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtccagggagctgcagcttccaggaatgatgagagaagagccccttcctcc
tccagtgtaccgccccctccctccccccagcatcctccacaagtaaaactcaaccctatg
ccagttggcaaagatatgtttacagagtccagctccagtaccgtaaagcaggaaaaatat
ttgtttgactacagttacagagactacatcctgntctggtatggaagcctcagcagagac
gagggccagctctaccacctgctctccgaggacttctgggaaattgccagacagctgcgc
cacaggctgagtcacgtggatgtggtcaaagtcgtttgcagtgatgtcgtgagagcgttg
ctcactcacttctgtgacctgaaggcggcgaatgccagacatgaagaacagccgaggcct
tttgtgttgcatgcatgcttgaggaactcagatgatgaagtaagatttctacagacgtgt
tctcgggttctggtgttttgtctcctcccctcaaaggatgtccagtctctcagcttacgc
ataatgcttgcagaaattctcacaacaaaagtcctgaagccagtagtggagttgcttagt
aatccagattatattaaccagatgctgcttgcccagttggagcacagagaacagatgaat
gaacatcacaagagagcctacacgtatgctccttcttatgaagagttcatcaagcttatt
aacagcaactctgatgttgagttcttgaaacaactaaggtatcagattgtagtggaaata
atccaggcaactaccattagcaccttcccccagctgaagaggcacaagggaaaagagact
gcggccatgaaagctgatctcctgagggccaggaacatgaaaaggtacatcaaccagctg
actgtggccaagaagcagtgtgagaagaggatcagaaatctgggaggcccttcctatgac
cagcaagaggatggggccttagatgagggggaagggcctcaaagccagaagattcttcaa
tttgacgatatcttggccagtactttctaccgagagcactttcgaaattacatggaaagg
atggacaagagagctctgattagtttttgggagtctgtggaatatttaaagaacgctaac
aagagtgaaatcccacaattagttggtgaaatttatcagaatttctttgtggagagcaaa
gaaatatccgtggaaaagtcactttacaaagaaatacagcagtgtcttgttggaaataaa
ggaattgacgtgttttgcaaaatccagggagatgtttatgagaccctgaaggataggtat
tacccttcatttattgtcagtgacctgtatgagaaattgatgatgaaagaggaagaaaag
cttgcctcgcagctgacttccaacaaggatgaaatgggcccaggaggtgaggctggcgag
gaagctgtggatgaaggcagcagtcggattaatgaacaagctagttttgctgtaaacaaa
ctacgagaactaaatgagaaacttgagtataaaaggcaagctctaaattctattcaaaat
gcgccaaaacctgataagaagattgtttctaagttgaaggaggagataattctaatagag
aaagaacgcacagatcttcagctgcacatggcaagaacagattggtggtgcgagaacctt
ggcatgtggaaggcctccatcaccagtggagaggttacagaagagaatggtgaacaaatg
ccctgttactttgtcacggttagcctacaagaagtgggaggagttgaaactaagaactgg
acagtccccaggaggctcagtgaatttcaaaatttacaccggaaacttagtgagtgtttc
ccttctttaaaaaaagtccagttgccttctcttagcaagctgcctttcaaatctatagat
caaaagtttatggaaaagtcaaagaatcaattaaataagtttttacagaatctgctttca
gatgaaagactgtgtcagagtgaagcactttatgcctttttgagcccttctcctgactac
ctcaaggttattgacgtgcaggggaaaaaatccactttttcattatcctcatttttggaa
agactccctcgtgacttcttctcccatcaggaggaggagatagaggaggacagtgacctg
tcagattatggtgatgatgtggacggaaggaaagatgccttggctgaaccctgcttcatg
ttgattggggagatttttgaacttcgtggaatgtttaaatgggtgagaagaacattaatt
gctctcgttcaggtcacttttggaagaaccatcaacaaacaaatccgggacacagtgaat
tggattttcagtgagcagatgttggtttactacatcagccttttccgggatgctttttgg
cccaatgggaaattggcaccaccgaccacaatccgaagcaaagaacaaagccaggaaaca
aaacagagagcccggcagaagctgctcgaaaacattccagatatgcttcagagccttgtt
ggacagcaaaatgcccgtcacggtataataaaaatattcaatgcactgcaagaaacgaga
gccaataagcatctgttatacgtgctgatggaactgctgctaattgaattgtgtcctgag
ctgagaactcatttagatcagcttagagctgggcaagtttga
DBGET
integrated database retrieval system
