Sus scrofa (pig): 100157555
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Entry
100157555 CDS
T01009
Symbol
TDRD1
Name
(RefSeq) LOW QUALITY PROTEIN: tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100157555 (TDRD1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100157555 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-MYND
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
100157555
NCBI-ProteinID:
XP_020929372
Ensembl:
ENSSSCG00000021075
LinkDB
All DBs
Position
14:124526013..124575166
Genome browser
AA seq
1283 aa
AA seq
DB search
MWSTHADKIDRKFILLKLGDGYIRLCNQLWSTELRHWRQSRASCARGRCTWALTAQALRW
RGRTGWALGSEVSTGCSSGRQGFHAKAEVTQARLQRQTSVNVALPLNRMSRNNLEASACK
MTEPFNFEKNDSTLPPHDALRSPGGHPNHPNFRLKSPETGNKKNNFLLCEQTKQYLVSQE
DSSVSSNPNGVSGEAAGSRGDRKMLPTGNPVSPLNIGNNSPPKEINSKPSNNVPPAKSKK
GDKLVENSLSINNPALFSSLGPPLRSTTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWSA
HSIVCKPVQQNFRKLEDNKSPFETKNLEVKNESDYPLGVTKEIAVCAGKIMFSDLRSLQL
RKTMEIKGTVTEFKHPSDFYVQLYSSEVSEYMNQLSSSLKETYANKAHEEDYIPVKGEVC
VAKYTVDQTWNRVLIQDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAIKC
FVASVIPAEGNWSSDCVRSIKSLLLEQCCSVKIVDILEEEVVTFAVDVMLTSSGKLLDHV
LIEMGYGLKPKGQNSKKQSADSGDLDDVGKMTAENKIVVDRSDLIPKVLTLNVGDEFRGV
VAHIQTPEDFFCQQLQSGHKLAELQASLSQYCSQVPPRSDFYPAIGDICCAQFSEDAQWY
RASVLAYASEDSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAGVKPSLGIW
TPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLIDAGFAEGDKGV
VPDKPSDLKEASGVPLGLEAKVSRLEWTWVELAVDQTVDVVVCMIYSPGEFYCHVLKEDA
LKKLNDLNKSLAEYCQQKLPNDFKAEIGQPCCAFFVGDGNWYRALVKEISPHGNVKVQFV
DYGNIEEVIADELQMIPSKFLKLPFQGLHCWLVDIQPRNKHWTKDAIARFQTCVSGKKLQ
ARVVEISENGVGIELTDLSSSYPRIISDILIDEHLVLKVSSPCKVLVKNRPVNKHDLQTD
ASGLQAISSTEQWXTVELPVNKTVHASVLEIISPNLFYALQMKYQVRNQAKLCALTAELV
EYCNSQKSPLAYRPKTGDACCAKYTDDDLWYRAVVLGTSDADVRVLYADYGNIETLPPCR
VQPISANHLEPPFQIIKCSLEGIIELNGSCSQLLLELLKNFMLNQNVMLSVKGVTKNVHA
VSVEKCSENGTVSIADKLVTYGLAKHITSKKQSASQKEKTNRMNCCCTALQKQVEKHEQI
LLFLLNNPTNQNKFIEMKKLLKS
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtacacatgcagacaagattgaccgaaaatttatactgttgaaactgggagat
gggtatataaggctttgcaatcagctctggagcacagagttgcgccattggcgccagagc
agggcttcctgcgcacgcggcaggtgcacgtgggcgctgactgcgcaggcgctacgctgg
cgcgggaggacgggctgggctcttgggagcgaggtgagcacagggtgctcatctgggcgg
cagggcttccacgcaaaggcagaagtcacccaggccaggcttcagagacagacatctgtg
aatgttgcattgccgcttaataggatgtcaagaaataacttggaggcatctgcctgtaaa
atgacagagccatttaattttgagaagaatgacagcacgcttccgccacatgatgcttta
cgaagtcctggaggacatcctaaccatcctaatttcaggttgaaaagcccagagactgga
aataagaagaacaattttttgctttgtgagcaaaccaaacagtatttggttagtcaggaa
gacagttcagtatcttccaaccctaatggcgtcagtggagaagcggctggatccagagga
gacaggaagatgttgccaacaggtaatcctgtgtcaccattaaatattggaaataattca
ccacccaaagaaataaatagtaagcctagcaataatgtgcctcctgcaaagtcaaaaaaa
ggagacaagttggttgagaattccttgtccataaacaacccagcgctcttcagctccttg
ggacctcctcttaggtcgaccacttgccatcgctgtggcctgtttgggtcactgagatgc
tcacagtgcaaacagacgtactactgctccacagcgtgtcagagaagggactggtcggcc
cacagcatcgtgtgcaaacctgttcagcaaaatttccgcaaacttgaagataataaatca
ccttttgaaacaaagaacttggaagtgaaaaatgagagtgactatcctcttggagttact
aaagaaatagccgtttgtgctggtaaaataatgttttctgatttgagaagcctacaactc
aggaaaaccatggaaataaagggtacagttactgaattcaaacacccaagcgacttttat
gtgcagttatattcttcagaagtttcagaatacatgaaccaactctcttcgagcttaaag
gaaacatatgcaaataaggcgcatgaagaggattatattcctgtgaagggagaagtttgt
gttgccaagtacactgtggaccagacctggaacagagtactgatacaagacctcgatgtg
ctgcagaagaaggcccaagtcttgtatattgattatggaaatgaagaaagaattccagta
aacaggattcacaagctgagcagaaacattgacttgtttcctccttgtgccataaagtgc
ttcgtggccagtgttatcccagcagaggggaattggagcagtgattgtgtccgaagtatc
aagtcgctgttgctggagcagtgctgctctgtgaagattgtggacatcttagaagaggag
gtggttacctttgctgtggatgtgatgctgacgagttcgggaaaactcttagaccatgtg
ctcattgaaatgggatatggtttgaaacccaagggacaaaattctaagaagcaaagcgca
gattcaggtgatcttgacgatgttggaaaaatgacagctgaaaacaaaattgtggtagac
agaagtgatctcatccccaaagtgctgactttgaatgtaggtgatgagtttcgtggcgtg
gtcgcccacattcagactccagaagacttcttttgtcaacagctgcaaagtgggcataag
cttgctgaacttcaggcgtcccttagccagtattgcagccaggtgccgccacgctcggat
ttttacccagccattggtgatatctgctgcgctcagttctccgaggatgcccagtggtac
cgggcctccgttttggcctatgcgtctgaggactctgtgttggttggctatgtagactat
ggaaactttgaaatccttagtttgacgagactttgtcccataactccaaagctgttggag
ttaccgatgcaagctatcaagtgtgtgctggcaggagtaaagccatcattaggaatttgg
actccagaagctatttgtctgatgaaaaaaattgtgcagaacaaaatgatcactgtgaga
gtggcggacaaattggaaaacagttccctggtggagcttacagatagatctgtgacgccc
cacatcagtgtcacccaagtgctcatcgatgcaggctttgccgagggggacaaaggggtc
gtgccagataagcccagtgacttgaaagaagccagtggtgttcccttgggtttagaagca
aaagtcagtcgattggagtggacatgggttgaacttgctgttgatcaaacagtagatgtt
gtggtctgtatgatatatagccctggagaattttactgccatgtgcttaaagaggatgct
ctaaagaaactcaatgacttgaacaaatcactagcagaatattgccagcagaagttgcct
aacgattttaaggcagaaatagggcaaccttgttgtgctttttttgtaggtgatggtaat
tggtatcgagctttagttaaggaaatctcaccacatggaaacgttaaagtacagtttgtg
gattatggaaacattgaagaagtgattgccgacgaactccaaatgatcccatcaaaattt
ctaaaacttccatttcaagggctgcactgctggctagtagatatacagcctagaaacaaa
cattggactaaagacgccatagcaagatttcagacatgtgtctcagggaaaaaactccaa
gcccgagtggttgaaatctctgaaaatggagtgggaattgaactcaccgatctttccagt
tcttaccccagaataattagtgatattctgattgatgaacatctggttttaaaagtcagt
tcaccatgtaaagtcttagtaaaaaacagacctgttaacaaacacgatcttcaaactgat
gcctcaggacttcaagccatttcttcaactgagcagtggnagacagtagaattgccagtt
aataaaactgtacatgcaagcgtattggaaatcataagcccaaacttgttttatgctctc
caaatgaaataccaggtaagaaaccaagccaaactgtgtgcattgacggctgagttggta
gaatattgcaattctcagaaaagtccattggcctatagaccgaaaactggagatgcatgc
tgtgccaaatacacagatgatgatctctggtaccgcgctgttgttctggggacctcagat
gctgatgtgagagtgctctatgcagactatggaaacattgaaactctgcctccttgcaga
gtgcagccaatctctgctaaccacctggagccccctttccagattattaaatgttccctt
gaagggataatagaattgaatggaagctgttctcaactactgctagaactactgaaaaat
ttcatgttgaatcagaatgtaatgctttctgtaaaaggagtgaccaagaatgtccacgcc
gtgtctgttgagaagtgttctgagaatggtaccgttagtatagctgataagctggtgaca
tacggtctggcaaaacacatcacgtctaagaagcaaagtgcttcacagaaagaaaagaca
aacaggatgaattgctgctgtacagcattacagaaacaagttgaaaaacatgaacagatt
cttcttttcctcctaaacaatccaaccaatcagaataaatttatcgaaatgaaaaaattg
ttaaaaagttaa
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