Sus scrofa (pig): 100157586
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Entry
100157586 CDS
T01009
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100157586 (ELP1)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
100157586 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
TPR_GEMI5
CHASE4
MMU163
Motif
Other DBs
NCBI-GeneID:
100157586
NCBI-ProteinID:
XP_001924429
Ensembl:
ENSSSCG00000005441
UniProt:
A0A480JST9
LinkDB
All DBs
Position
1:249905550..249980570
Genome browser
AA seq
1422 aa
AA seq
DB search
MLYFAGLRGRTATPSPPRYVTPVVRRACPLTSLWSLRFAVRSSAQLSHYRRGSGGPAPLP
GDPRAHRGPNLGRTHGCLGVLRAPRRSHFVMRNLKLLRTLEFRDIQAPGKPQCFSLRGEQ
GTVLIGSEHGLVEVDAVTREVKNEIPLVAEGFLPEDGSGCIVGIQDLLDHESVCVATASG
DVILCNLSTHQLECVGSVASGISVMSWSPDQELVLLATGQQTLIMMTKDFEPIMEQQIHQ
DDFGESKFITVGWGRKETQFHGSEGRQAAFQVHMHESALPWDDHRPQITWRGDGQFFAVS
VVCPETGARKVRVWSREFALQSTSEPVAGLGPALAWKPSGSLIASTQDKPNQQDVVFFEK
NGLLHGHFTLPFLKDEVKVNDLLWNADSAVLAVWLEDLQTEEKSTLKSYVQLWTVGNYHW
YLKQSLPFSSCGKSKIVSLMWDPVAPYRLHVLCQGWHYLCYDWHWTTDRSSGDNLSDMAN
VAVVDGNRVLVTVFRQSVVPPPMCTYRLLLPHPVNQVMFSAHPTESNNLAVLDASNQISV
YKCGDSPSVDPTVKLGAVGGNGFKISLRTPHLEKRYKIQLENSEEEEVNPLTLSLLTWVQ
EDIFLAVSHSHSRPQSVLHHLTVAPSETDNELGQLNISSSVTVDGSIISLCCNSKSKSVA
LQMTGGQILKYLWESPSPAVEPWKNPGGFPVRFPYPCTQMELAMIGGEECVLGLTDRCRF
FINDTEVASNVTSFAVYDEFLLLTTHSHTCLCFCLREASLKTLQAGLSSSHVPNGESLRK
VERGSRIVTVVPQDTKLILQMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRI
NLNLIHDHNPKVFLENVDTFIRQIDSVNHINLFFTELKEEDVTKTMYPPPSTPTVQPSSD
PDGKKVDLICDAMRAAMENINPHKYCLSILTSHVKKTTPELETVLQKVHELQGNAALVPD
AVSAEEALKYLLLLVDVNELYDHSLGTYNFDLVLMVAEKSQKDPKEYLPFLNTLKKMETN
YQRFTIDKYLKRYEKAIGHLSKCGPEYFPECLNLIKDKNLYNKALELYPPDSQQYKDISI
AYGEHLLQEHLHEPAGLVFARCGAHEKALSAFLACGNWRQALCVAAQLELNKDQLASLGR
TLAGKLVEQRKYSDAAAVLEQYAQDYEEAVLLLLEGAAWEEALRLVHKYNRPDIIETNVK
PSILEAQKNYMAFLDSQSSIFSRHKNRLLVVRELKEQAQQVNLDDEAPHGQESDLFSETS
SVMSGSDMSGRYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDLALLEALSEVVQSTE
QLKDEISHILKMLFLFGFDEQGRELQKTFEDTLQLMERSIPEIWTLTPQQSSATPVLGPN
STANSIMASYQQQKTSVPVLDADLFIPPKINRRTQWKLSLLE
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgctttactttgcggggctcagaggaaggacggccacgccttctccgcctcgttacgtc
actcctgtagtgcgccgcgcgtgtccgcttacctcgctgtggagtctgcgtttcgcggtt
cgctcctctgcccagctcagtcactaccggagggggtcgggcggcccggctcccctgccc
ggagacccccgtgctcaccgcgggcccaacctcgggcggacgcacggctgtttgggcgtc
ctcagagctccgcgcaggagtcacttcgtcatgaggaatctaaagttgcttcggaccctg
gagttcagggacattcaggctcccgggaaacctcagtgcttctctctccgaggtgaacag
gggacagtgctcattggctcggaacatggactggtagaggtagacgctgtcacgagagag
gtgaaaaatgaaattcctttggtggccgaaggcttcctcccagaggatggaagtggctgc
atcgttggtatccaggacttgctggatcatgagtctgtgtgtgtggccacagcctctgga
gatgtcatactttgcaacctcagcacacatcagctggaatgtgttgggagtgttgccagt
ggcatctctgtcatgagttggagtcctgaccaagagctggtgcttcttgccacaggtcaa
cagaccctaattatgatgacaaaagactttgaaccaattatggaacagcaaatccaccag
gatgattttggtgaaagcaagttcatcactgttggctggggcaggaaagagacccagttc
catggatcagaaggcaggcaagcagcgtttcaggtgcatatgcacgagtctgctttgccc
tgggatgaccatagacctcaaatcacgtggcgtggtgatggacagttttttgctgtgagt
gttgtttgcccagagacaggggctcggaaggtcagagtgtggagccgggaatttgcttta
cagtcaaccagtgagcctgtggcaggactgggacctgctctggcttggaagccctcagga
agtttgattgcatctacacaagataaacctaatcagcaggatgttgtgttttttgagaaa
aatggacttctccatggacattttacacttcctttcctcaaagacgaagttaaggttaat
gaccttctctggaatgcggattctgctgtgctcgcagtttggctggaggaccttcagacg
gaagaaaagtccactctgaaatcctatgttcagctctggactgttggaaactatcactgg
tatctcaagcaaagtctgcccttcagctcctgcgggaagagcaagattgtgtctctgatg
tgggacccggtggccccgtaccggctgcatgttctctgtcaaggctggcattacctctgc
tatgactggcactggacgactgaccggagttcaggagataatctgagcgacatggccaac
gtggctgtggtggatggaaacagggtcttggtgacagtcttccggcagagtgtcgttcca
cctcccatgtgcacataccgactgctgctcccacaccctgtaaaccaggtcatgttctct
gcacaccctacagagagtaacaaccttgctgtcctggatgccagtaaccagatttctgtt
tataaatgtggtgacagtccaagtgtagaccctacagtgaaactgggagctgtgggtgga
aatggatttaaaatttcccttagaacgcctcatctggaaaagagatacaaaattcagctt
gagaacagtgaagaagaagaagtaaacccattgacgctcagtcttctcacctgggttcag
gaagacattttcctggccgtgagccacagtcactccaggccacaatctgtccttcaccat
ctgactgtggccccttctgagacggacaacgagctgggacagctcaatattagttcatct
gtgacagtggatggaagcataatcagcctgtgttgcaactccaagtccaagtcagtagca
ctgcagatgactggtggccagatacttaagtacctttgggagtcaccctctccagctgtt
gaaccatggaagaaccctggtggatttcctgttcgatttccttatccatgcacacagatg
gaattggccatgattggaggagaggaatgtgtccttggtctgactgacagatgtcgcttt
ttcatcaatgacactgaggttgcttcaaatgtcacatcatttgcagtatatgatgagttt
ttattgttgacaactcattcccatacctgcctgtgtttttgcctgagagaggcttcattg
aaaacattacaggcaggtctgagcagcagccacgtgcctaatggggaatctctgcgaaag
gtggagaggggttcacgcattgtcacggttgtgccccaggacacaaagcttatattacag
atgccaaggggaaacttagaagttgttcatcatcgagctctggttttggctcaaatccga
aagtggttggacaaacttatgtttaaagaagcatttgaatgcatgagaaaactgagaatt
aatctcaatctgattcatgatcataaccctaaggtgtttcttgaaaatgtggacaccttc
ataagacagatcgattctgtaaatcatattaatttgtttttcacagaattgaaggaagaa
gatgttacaaagaccatgtaccctccaccatctacccccactgtccagccgtccagtgat
ccggatgggaaaaaagtggaccttatctgcgacgcgatgagagcagccatggagaacata
aatcctcacaagtactgcctatcaatactcacgtctcatgtgaagaaaacaactccagaa
ctggaaactgtgctgcagaaggtacacgagcttcaaggaaatgctgccctggttcctgat
gctgtgagtgccgaagaggccctgaagtatttgctgcttctggtagatgttaatgaatta
tatgatcattctctcgggacctacaactttgatttggtcctcatggtagctgagaagtca
cagaaggatcctaaagaatatcttccatttcttaatacacttaagaaaatggaaacaaat
tatcagcggttcaccatagacaaatacctgaaacggtatgaaaaagccattggccacctc
agcaaatgtgggccggagtacttcccagaatgcttaaacttaataaaagataaaaatttg
tataacaaagccctggagttatacccgccggactcgcagcagtacaaggacatcagcatt
gcttatggggagcatctgctgcaagagcacctccatgagccagcggggcttgtgtttgcc
cgctgcggtgcccacgagaaagctctcagcgcctttctggcttgtggcaactggcggcaa
gcgctctgtgtggcagcccagctggaactgaacaaagaccagctggctagcctgggcaga
actctggcaggaaagcttgttgagcagaggaagtacagtgatgcagccgccgttttggaa
cagtacgcccaggattatgaggaagccgtgctcttgctgttagaaggagctgcctgggaa
gaagctctgagactggtacacaaatataacagaccggatattatagaaaccaatgtaaag
ccttccattttagaagcccagaaaaattatatggcatttctggactctcagtcatccata
ttcagtcgccataaaaaccgtctgttggtggttcgagagctcaaggaacaagcacagcag
gtgaatctggatgatgaggcaccccatggtcaagagtcagatctcttctctgaaactagc
agtgtcatgagtggcagtgacatgagtggcagatactcccatagtaactccaggatatcg
gcgcgatcatctaagaatcggcgcaaggcagaacggaagaagcacagcctcaaggaaggg
agtcccctggaggatctggcccttctggaggcactgagtgaagtggtgcagagcacggag
caactgaaagatgaaatatcccatattttaaagatgctttttctctttgggtttgatgag
caaggaagggaattacagaaaacctttgaagatactctgcagctaatggaaaggtcaatt
ccagaaatttggactctcaccccccagcagagttcagctacaccagttctagggcccaat
tcgactgcaaatagtatcatggcctcttatcaacaacagaagacttcagttcctgttctt
gatgctgaccttttcataccaccaaagatcaacagaagaacccagtggaaactaagcctt
ctagagtga
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integrated database retrieval system
