Sus scrofa (pig): 100157596
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Entry
100157596 CDS
T01009
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04721
Synaptic vesicle cycle
ssc04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
100157596 (RIMS1)
04721 Synaptic vesicle cycle
100157596 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100157596 (RIMS1)
Membrane trafficking [BR:
ssc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
100157596 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
100157596 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
IBR
Motif
Other DBs
NCBI-GeneID:
100157596
NCBI-ProteinID:
XP_020928538
UniProt:
A0A8D1ZRY8
LinkDB
All DBs
Position
1:51785140..52246456
Genome browser
AA seq
1663 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMPELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MVKPAACKTPRNAEHQPHQPPPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICR
KTKFADGCGHLCSYCRTRFCARCGGRVSLRSNSEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEAPREKKARLQERSRSQTPLSTAAASSQDQAPSSAQPD
RSKGAELSQPAGGPEQKQASSRSRSEPPRDRKKTPGLSEQNGKGAPKGERKRVPRSSVQP
GEGPAEERERKERRESRRLEKGRSQDYPDVPEKREDGPAVEDEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAAAGPEGRAGPRAPAAARGSP
PASPRAYSAERTADARAPSAQQLANRSPPAPRPGPGPADVPESRAPEPLRKQSRLDPGSA
VLVRKAKREKVETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKRRQMSVSSSEEEGVSTP
EYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVI
LNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNG
KPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMER
PSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPY
VKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEE
ESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGETSSKKLQRS
QRISDSDISDYEVDDGIGVVPPVGYRSSAREGKPTTLTVPEQQRTTHHRSRSVSPHRGDD
QGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSRDVDSQYLSEQDSELL
MLPRAKRGRSAECLHTTRHHVRHYKTLPPKMPLLENCSHWSIYSDLQPSLDRARSASTNC
LRPDASLHSPERERGRWPPSLDRRRPPSPRIQIQHASPENDRHSRKSERSSIQKQTRKGT
AADAERVLPPCLSRRGYAAPRATDQPVLRGKHPARSRSSEHPSVRTLCSMHHLVPGGSAP
PSPLLTRMHRQGSPTQSPPADSAFSSRRGRQLPQVPVRSSSIEQEQEKYNSSTKASLVVE
ERTRQMKMKVHRLKQTAGSGSSQELDREQYSKYNIHKDQYRSCDNVSAKSSDSDVSDVSA
ISRTSSASRLSSTSFLSEQSERPRGRISSFTPKMQGRRMGTSGRAIIKSTSVSGEMYTLE
HNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRS
TETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLV
GRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIA
KKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLS
SMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtcctcgcccgcccaccgtgcctccccccatgccc
gagctgcccgacctgagccacctgaccgaggaggagaggaacatcatcatggcagtgatg
gaccggcagaaggaggaggaggagaaagaagaagccatgctcaagtgtgtggtcagggac
atggtgaagcctgctgcctgcaaaaccccaagaaatgctgagcaccagccccaccagcct
ccaccgagactgcatcaacaatttgaaagctataaggaacaagtgagaaaaataggggaa
gaagctcggcgttatcagggcgagcacaaagacgatgctccaacctgtggaatctgccgg
aagaccaagtttgcggatgggtgcggccacctgtgctcctactgccgcacaaggttctgc
gctcgctgtgggggccgcgtctccctgaggtccaacagcgaggacaaagtggttatgtgg
gtatgcaatttgtgtcgaaagcagcaagaaatcttaaccaagtctggggcgtggttcttt
ggaagcggcccccagcagccaagtcaggacggaaccctcagcgatacagctacaggtgct
ggttctgaggccccaagagaaaagaaagcccggctccaggagagatcgcggtctcagacc
ccgctgagcacagccgctgcctcctcccaggaccaggctccctccagtgcacagccagac
aggagcaaaggggctgagctgtcccagccagcagggggcccggagcagaagcaggcttca
tccaggtctagaagtgaacctcccagagacaggaagaagaccccaggactctcagagcag
aatggcaaaggagccccgaagggcgagaggaaacgtgtgcccaggtcctcggtgcagccc
ggggaggggcccgcggaagaacgggagcggaaagaaaggcgggaaagccgaaggctggag
aaaggccgatcccaggactacccagacgtgcctgagaaacgagaggacggcccagcggtg
gaggacgagaagcagagaaaggaggaggagtaccagacacggtaccgcagcgacccgaac
ctggcgcggtacccagtgaagccaccgccagaggagcagcagatgcgcatgcacgcgcgg
gtgtcccgcgccaggcacgagcggcgccacagcgacgtggccctgccgcgcactgaagcg
gccgcagggcccgagggcagagccggcccgcgcgcgcccgccgcggctcggggctcgccg
cccgcctcgccgcgcgcctactcggccgagaggaccgcggacgcgagggcgccgagtgcc
cagcagctcgccaatcgcagcccgccggcgccccggcccggcccaggccccgccgacgtc
ccggagtcgcgggcccctgagccgctccggaagcagagccgcctggaccctggctcggcc
gtcctcgtgcgcaaggccaagcgcgagaaggtggagaccatgctacgcaacgactcgctg
agctccgaccagtccgagtccgtgcggccgtcaccgcccaagccgcaccgcgccaagagg
ggcggcaagaggcgccagatgtcggtgagcagctctgaggaggagggcgtgtccacgccg
gagtacaccagctgcgaggacgtggagctcgagagcgagagtgtcagtgagaagggtgac
ttggattactactggctggatcctgccacgtggcatagccgggaaacatcacctattagt
tcgcatcctgtaacgtggcaaccatctaaagagggagatcgattaattggacgtgttatt
cttaacaagagaacaacaatgcccaaagaatcaggtgcattactgggtctgaaagttgtt
ggaggaaaaatgactgacttgggacgccttggtgccttcatcaccaaagtaaagaagggt
agccttgcagatgtagttggacacttgagagcaggggatgaagttctagaatggaatggt
aaacccctgccgggagctacaaatgaagaagtttacaacattattttagaatcaaaatca
gaacctcaagttgaaattattgtttcaaggcctattggtgacattccacggattcctgag
agctcccatcctccactggagtccagttccagttcctttgaatctcagaagatggaaagg
ccttccatttctgttatttctccaacaagcccaggagctctcaaagatgccccacaagtc
ttaccaggacaactttccgtgaaactgtggtatgataaagtgggacaccagctgattgta
aatgttctgcaagccacagatctgccccctagagtagatgggcgtcccaggaatccctat
gtaaaaatgtattttcttcctgatagaagtgataaaagtaaaaggagaaccaaaacagta
aagaaagtactagagccgaaatggaatcaaacttttgtctattcacacgtacatcgtaga
gattttagagaacgcatgctagaaataactgtgtgggaccagcccagagtgcaagaagaa
gagagtgaattccttggagagatcctcatagagttggagacagcacttttagatgatgag
ccacactggtataaacttcagacccacgatgaatcttcactacctctgcctcagccatca
cctttcatgccaaggcgacatatccatggagaaacctccagcaagaaactacaaaggtcc
cagcgaatcagtgatagtgacatctcagattatgaggttgatgatgggattggagtagtt
cctccagtaggctataggtctagtgctagagaaggcaaacctacaacattaactgtgcca
gagcagcagagaacaactcatcaccgctcacggtctgtgtctcctcatcgcggcgatgat
cagggaaggccgcgttcacgtttaccaaatgtgccattacagaggagtttagatgaaatt
catccaacaagaaggtcacgttctccaaccagacaccatgatgcctcccgaagtccagtt
gaccacagatccagagatgtggatagtcagtatttatcagaacaagacagtgagcttctt
atgcttcccagagcaaaacgaggacgaagtgcagaatgcctacacaccaccagacatcat
gttaggcactataaaacattaccgcccaagatgcccttattagagaactgttctcactgg
agtatttacagtgacctgcagccctcccttgacagggcgaggagtgctagtaccaactgc
ttgagaccagatgctagtttgcattcaccagaacgagaaaggggtagatggcccccctcc
ctagataggagacggcctcctagccccaggattcaaatccagcatgcgtctccggagaat
gacaggcactccagaaagtctgaaagatctagcatccaaaaacaaactaggaaaggcact
gccgctgatgcagaaagggttctcccaccatgtctttctagaaggggatacgcagcccca
agagcgactgatcagccagtccttaggggaaaacatcccgctcgctccaggtcgagtgag
caccctagtgtcagaacactgtgttctatgcaccaccttgtccctggagggtcggcacca
ccttctccgctcctgacaaggatgcaccgacaaggaagtcccacccagtctcctcctgca
gactcagccttcagcagccgcaggggaagacagctcccacaagtgccagtgagaagcagc
agtatagaacaagagcaagaaaaatataactcatccacaaaagcaagcttagtagtggag
gagcgtacaagacagatgaaaatgaaagtgcatcgacttaagcagacagcagggtctggg
tctagtcaagaacttgatcgcgagcaatattccaagtataacatacataaagatcagtac
agaagctgtgataacgtctctgccaaatcatctgatagtgatgtcagtgacgtgtccgcc
atctcccgcaccagcagtgcctcccgcctcagcagcacaagcttcctgtcggagcagtct
gagcgcccccggggcagaattagttcatttacccctaaaatgcaaggcagacggatgggg
acttcaggaagggccatcatcaagagcacaagtgtcagtggagagatgtacactctggag
cataatgacggcagtcagtcggacacagctgtgggtacagttggagcaggtggaaagaag
agaaggtccagcctgagtgccaaagtggttgccatagtgtctcgaaggagccgaagcaca
tcccagctgagccaaacagagtcaggccacaagaagttgaaaagcaccatacagagaagc
acagaaacaggaatggcagcagagatgagaaagatggtacggcagcccagtcgggagtcg
acagatggcagcattaacagctacagctccgagggaaacttaatatttcctggagtgcga
ctaggagcggatagtcaatttagtgattttcttgatggattgggaccagcccagcttgtt
ggccgccaaaccctcgccacccctgcaatgggtgatatacaaattggaatggaggataaa
aagggccagttagaagttgaagttattagagcacgaagcctcactcaaaaacctggctcc
aaatctacgccagctccatatgtcaaagtgtatcttttggagaatggggcctgcatagcc
aagaagaagacaagaattgcacgaaagacccttgatcccttgtatcaacagtccctggtt
tttgatgaaagtccacagggtaaagtccttcaggtgattgtctggggggactacggcagg
atggaccataaatgctttatgggtgtggctcagatcttgttggaggaactcgatctttcc
agcatggtcatcggctggtacaagctgttcccaccatcatcgctggtggaccccacactc
acccctctgacccgccgggcttcccaatcatctctggaaagttcaacgggtcccccctgc
atccgatcctaa
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