Sus scrofa (pig): 100157608
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Entry
100157608 CDS
T01009
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100157608 (MMS19)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100157608 (MMS19)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100157608 (MMS19)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100157608 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
INTS7_N
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
100157608
NCBI-ProteinID:
XP_013845921
Ensembl:
ENSSSCG00000010520
UniProt:
A0A480I431
A0A4X1UB84
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All DBs
Position
14:complement(108853038..108886587)
Genome browser
AA seq
1029 aa
AA seq
DB search
MAAATALEAVAPTGALWGLVQDFVMGQQEGPADQVAADVKSGSYTILQVVEALGSSLENP
EPRTRARGVQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLCV
ALPSGLAVSVLKAIFQEVHVQSLPQVDRHTVYSIITNFMRTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPYGIQRED
LILSLRAVLASTPRFAEFLLPLLIEKVDSELLSAKLDSLQTLNACCAVYGQKELKDFLPS
LWASIRREVFQTASERVEAEGLAALNSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHL
CEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGF
LKLQQKWSYEDKDERPLSGFKDQLCSLVFTALTDASTQLQLVGIRTLTVLGAQPDLLSPG
DLELAVGHLYRLSFLEEDSQSWGAALEASGTLASLYPVAFSSHLVPKLAKELCIEESDMA
RGDGPTKCSQHLRCLQALSAISTHPSIVQETLPLLLQHLRQMNKGNMAAGTSEIIAVCQS
LQQVAEKCQRDPESCWYFHQTAIPCLLSLAVQASMPEKEHSVLKKVLLEDEVLAAMVSVI
GTATTHLSPDLAARSVAHIVPLFLDGNISFLPENSFPGRFRPFQDGSSGQTRLVALLMAF
VCSLPRNVEIPQLNQLMRELLELSCCHNCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQLA
VDKVETGLSSGPYRSQAFTLLLWITKALLLRYHPLSSCLTDQLMGLLSDPELGPAAADGF
SLLMSDCTDVLTRAGHAEVRLMFRQRFFTDNVPALVRGFHAAPQDVKPNYLKGLSHVLNR
LPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKFLN
LSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALATPLDDKKRLVRKEAVLARGE
WFLLGSPGS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccaccgctctggaggcggtcgcgcctacgggcgccctgtggggcctcgtg
caagacttcgtcatgggtcagcaggagggccccgcagaccaagtggctgcagatgtgaaa
tctggaagctatacaatattacaagtggtggaagcccttgggtcttctctagagaaccca
gaaccccgaactcgggcacgaggagtccagcttttgtcacaggtgctacttcagtgtcac
tccttgctcctggagaaagaagtggtacacctaatcctgttctatgagaaccggctgaag
gaccatcatcttgtgatcccgtctgtcctgcagggtttgagggcacttagcctgtgtgtg
gccctgccttcagggctggctgtctctgtgcttaaagccatcttccaggaggtccacgta
cagtccctgccacaggtggaccgacacacagtctacagcatcatcaccaacttcatgcga
actcgggaagaagagctgaagggcctaggagctgacttcacctttggcttcatccaggtg
atggatggggaaaaggatccccgtaatcttctggtggccttccgcatcgtccatgacctc
atctccagagactatagcctaggaccctttgtggaggagttgtttgaagtgacatcctgt
tacttccctattgattttacccctccacctaacgatccctacggtatccagagagaggat
ctcatcctcagtcttcgagctgtgctggcttctacaccgcgatttgccgagttcctactc
cccctgctgatagagaaagtggattctgagcttctgagtgccaagctggattctctgcag
actctgaatgcttgctgtgctgtatacggacagaaggaactaaaggacttcctacccagc
ctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtagaggccgag
ggcctggcggcccttaactccctgaccgcgtgtttgtctcgttctgtgctgagggctgat
gctgaggacctccttgactccttccttagcaacattctacaggactgcaggcaccatctg
tgtgaaccggacatgaaactggtgtggcctagtgccaaactcttgcaggcggctgcaggt
gcatctgcccgggcctgtgaccacatcaccagcaatgtgctgcctctactcctggagcag
ttccacaagcatagtcagagcaaccagcggcggacaatccttgaaatgatcctgggtttc
ttgaagctgcaacagaaatggagctatgaagacaaggatgaaaggccattgagtggcttc
aaggaccagctgtgctcactggtattcacggccctgacagacgccagtacccagcttcag
cttgttggcatccgtacactcacagtcttgggtgcccagccagatctcctgtctcctggg
gacttggagctggcagtgggtcacctgtacagactgagcttcctggaagaggattcccag
agttggggggcagcgctggaagcatcaggaaccctggcctctctctaccctgtagccttc
agcagccacctagtgcccaagcttgccaaagagctgtgcatagaggagtcagatatggct
agaggggatgggcccaccaaatgctcccagcatctgcgctgcctacaagccttgtcagct
atttcaacacaccccagcattgtccaggagaccctgcctcttctactgcagcatctccgc
cagatgaacaaagggaatatggctgcaggaaccagtgaaattattgctgtctgtcagagc
ctccagcaggtggcagaaaaatgccagcgagaccctgagagctgctggtatttccatcag
acagctataccttgcctgctttccttggctgtgcaggcttccatgccagagaaggaacac
tcagttctgaaaaaagtgctgttggaggatgaggtcttggctgccatggtgtctgtcatt
gggacggccaccacccacttgagccctgacttagctgcccggagtgtcgcccacatcgtg
cccctcttcttggatggcaacatctccttcctgcctgaaaacagcttccctggcagattc
cggccatttcaggatggctcctcagggcagacgaggctggttgcactgcttatggccttt
gtctgctcccttcctcgaaatgtggaaatccctcagctgaaccaactcatgcgggaactt
ttagagctgagctgctgccacaactgccccttctcctccactgctgctgccaagtgcttt
gcaggactcctgaacaagcaccctgcagggcaacagctggatgagttcctgcagctggct
gtggacaaagtggagactgggctgagctctgggccctatcgtagtcaggccttcacactg
cttctctggatcacaaaggccctactgctcagataccatcctctcagctcctgccttaca
gatcagctcatgggcctcctgagtgatccagaactaggcccagcagcagctgatggcttc
tctctgctcatgtctgactgcactgacgtgctgactcgtgctggccacgccgaggtgcgg
ctcatgttccgccagcggttcttcacagataacgtgcctgctttggtccggggcttccat
gctgctccccaagatgtgaagccaaattacctgaaaggtctgtctcatgtacttaacagg
ctaccaaagcctgtgctcttgccggagctgcccacgctgctttccttgctgctggaggcc
ctgtcctgccccgactccgtggtacagctctccaccctcagctgccttcagcctcttcta
ctggaagcaccccagatcatgagtcttcatgttgacacccttgtcacaaagtttctgaac
ctcagctccagtccttccatggctgtccggattgccgcactgcagtgtatgcacgctctt
actcgcctgcccacccccgtgctgctgccgtacaaaccacaggtgatccgggccttagcc
acacccctggatgacaagaagagactggtgcgtaaggaggcagtgttagccaggggagaa
tggtttctgctggggagtcctggcagctga
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