Sus scrofa (pig): 100157635
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Entry
100157635 CDS
T01009
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
ssc04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100157635 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
100157635 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100157635 (TRPC4)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100157635 (TRPC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
YVC1_C
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
C613_03_C
Motif
Other DBs
NCBI-GeneID:
100157635
NCBI-ProteinID:
NP_001139340
Ensembl:
ENSSSCG00000009362
UniProt:
C0JJ16
LinkDB
All DBs
Position
11:complement(13300288..13519001)
Genome browser
AA seq
977 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLPDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
SGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQGTKESSNSVDSDEK
SDNEGGSKDRKKNFSLFDLTTLIHPRSAAIASERHNISNGSALLMQEPPREKQRKVNFVT
DIKHFSLFHRRSKQHAAEQNANQIFSVSEEVARQQAEGPLERNVQLESRGLASRGDLNIP
GLSEQCILVDHRERNTDSLSLQVGKRVCAFKSEKVVVEDTVPIIPKEKHTKEEDSSLDYD
ANLSDTVTHEDYVTTRL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgttaatgctccctacagagaccgcatccctctc
aggatagtccgagcagaatcggaactctcaccatcggagaaagcctacttaaatgctgtg
gaaaagggagattacgcgagtgtcaagaaatccctagaggaagctgaaatttacttcaag
atcaatattaattgcattgatcctcttggaagaacggctctcctcattgcaatcgaaaac
gagaacctggagctcattgaacttctcttaagctttaacgtctatgttggagatgctctg
ttacacgctatcaggaaggaagtcgtcggagctgtcgagctgctactgaaccacaaaaag
cccagtggagagaaacaggtgcctcccatactccttgacaagcagttctctgaattcact
ccagacattacacccatcattttggcagcccatacaaataattacgagataataaaactt
ttagttcagaagggtgtctcggtgcccagaccccacgaggtgcgctgtaactgcgtcgaa
tgtgtgtccagctcagacgtggacagcctccgccactcccgctccagactcaacatctac
aaggccctggccagcccctcgctcatcgccttgtccagcgaagacccttttctcacggcc
tttcagctaagttgggagctccaagaactgagtaaggtggaaaatgaattcaagtcggag
tatgaggagctgtcacaacagtgcaaacagttcgcgaaggacctgccggatcagacgaga
agttccagagagctggaaatcattctcaattaccgggatgacaacagtctcatcgaagag
caaagtggaaatgatctcgcgagactcaaattggccattaagtaccgtcaaaaagagttc
gtcgctcagcccaactgtcaacagctgctggcgtcccgctggtacgatgagtttcccggc
tggaggaggagacactgggccgtgaagatggtgacgtgtttcataataggacttcttttc
cccgtcttctctgtgtgctaccttatagctcccaaaagccccctgggactgttcatccga
aagccttttatcaagttcatctgccacacggcgtcctatctgacttttctgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggcccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaactccttatatttagcaacaatctccttgaaaatcgttgcatttgtaaagtacagt
gctcttaacccacgagaatcctgggacatgtggcatcccacgctggtggccgaagcttta
tttgctatcgcaaacatattcagttccctgcgcctgatctcactgttcacggccaattct
cacctggggcctctgcagatatctctgggaaggatgctcctggacattctcaagtttcta
ttcatctactgcctcgtgctgctagcatttgcaaatggcctaaatcagctgtacttctat
tatgaagaaacaaaagggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgagacactccagtccctgttttggtcaatatttgggctcatcaac
ttatatgtgaccaatgtcaaggcacagcatgaattcactgagtttgttggtgccaccatg
tctgggacatacaatgtcatctctctggttgtcctactcaacatgttaatagctatgatg
aataattcttaccaacttattgctgatcatgcagacatagaatggaaatttgctcgaaca
aagctttggatgagttattttgaagaaggcggtaccttgcctactcccttcaatgtcatt
ccgagccccaagtctctctggtacctgatcaaatggatatggacacacttgtgcaagaaa
aagatgagaagaaagccggaaagctttggaacaattgggaggcgagctgctgataatctg
agaagacaccaccaatatcaagaagtcatgaggaacctggtcaagcgatatgtggccgct
atgatcagagacgccaaaactgaagaaggcctgactgaggagaactttaaggaactgaag
caggacatttcgagcttccgctttgaagtcctggggttgctgagaggtagcaagctttct
actgtacagtctgctcagggcacaaaggagtcctctaactcagtggactcggatgaaaag
agtgataacgaaggcggcagcaaggacaggaaaaagaacttcagccttttcgacttgacc
accctgattcacccgcgatctgcagctattgcttccgagagacataacatcagcaacggg
tccgccctgttgatgcaggaacccccgagggagaagcagaggaaagtgaattttgtgacc
gatatcaaacacttcagcttatttcacagacgatcaaaacaacatgctgctgagcaaaat
gcaaaccaaatcttctctgtttcagaagaggtggctcgtcagcaagctgaaggacccctg
gagagaaacgtccaattggaatctcgaggattagcttcaaggggtgacttgaacatcccg
ggtctcagcgaacaatgtatattagtagatcatcgggaaagaaatacagactccctgagt
ttacaagtgggcaagagagtgtgcgccttcaagtcggagaaggtggtggtggaggacact
gttccaatcataccaaaggagaaacatacaaaggaagaggactctagtctagactatgat
gcaaacctctcagacacggtcacccacgaagattacgtgaccacaagattgtga
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