KEGG   Sus scrofa (pig): 100157860
Entry
100157860         CDS       T01009                                 
Symbol
TDP2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100157860 (TDP2)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     100157860 (TDP2)
SSDB
Motif
Pfam: Exo_endo_phos UBA_4 Exo_endo_phos2 UBA_8
Other DBs
NCBI-GeneID: 100157860
NCBI-ProteinID: NP_001230615
Ensembl: ENSSSCG00000001092
UniProt: A0A4X1VGX0 A0A5G2R2R0
LinkDB
Position
7:complement(19489381..19502437)
AA seq 362 aa
MEQKSGLEDGPELEQEEGEPEVKKRRLLCVEFASVATCDAAVAQCYLAENDWEMERALNS
YFEPAVEENALKSRPETPNEPESCVDLTKEETSDSFSCKTSTSENVQQEDGSVFSFITWN
IDGLDLNSLLERARGVCSYLALYSPDVIFLQEVIPPYYTYLKKKASSYEIITGNEEGYFT
AIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVHVSVSGNELCLMTSHLESTRGHAEERMNQ
LKMVLKKMQEAPESATVIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQ
MNSNLGIAATCKLRFDRIFFRAAAEGSHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDV
IL
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggagcagaaaagcggcctggaggatggaccggagctggagcaggaggagggagagccc
gaggtgaagaagcgccgacttctgtgtgtggagtttgcctcggtagcgacttgcgacgct
gccgtggctcagtgctacctggccgagaacgattgggagatggaaagagcgctgaactcc
tacttcgagccggccgtggaggagaacgctttaaaaagtcgtcctgagacccccaatgag
cccgagtcctgtgttgacttaaccaaggaagaaacaagtgattcctttagttgtaaaacc
agcacatctgaaaatgttcagcaagaagatggcagtgtgttctctttcattacctggaat
atagatggattggacctaaacagtctgctcgagagggctcgaggggtgtgttcctattta
gcattgtacagcccagatgtgatatttctacaggaagttattcccccgtattatacctac
cttaagaagaaagcaagtagttatgagattattacaggtaatgaagaaggatatttcaca
gctataatgttgaagaaatcgagagtgaaatttaaaagccaagagattattccttttcca
aatacaaaaatgatgagaaaccttttgtgtgtgcatgtgagtgtgtcaggaaatgaactt
tgccttatgacttctcacttggagagcaccagagggcatgccgaggaacgaatgaatcag
ctgaaaatggttttaaagaaaatgcaagaggctccagagtcagctacagttatatttgca
ggagatacaaatttaagggatcaagaagttaccaaatgtggtggcttacccaacaacatt
ttggatgtctgggagtttttgggcaaacctaagcattgtcagtatacatgggatacccaa
atgaactctaatcttggaatagctgctacttgtaagcttcgttttgatcgaatatttttt
agagcagcagcagaaggcagccacatcattccccgaagcttggacctccttgggttggaa
aaactggactgtggtagatttcctagtgatcactggggtcttctgtgcaatttagatgta
atattgtga

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