Sus scrofa (pig): 100157879
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Entry
100157879 CDS
T01009
Symbol
BMS1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100157879 (BMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100157879 (BMS1)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
GTPase
100157879 (BMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
RNA_helicase
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100157879
NCBI-ProteinID:
XP_005671051
UniProt:
A0A4X1U1W8
A0A8D1SL75
A0A8D0PLQ9
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All DBs
Position
14:61056075..61125984
Genome browser
AA seq
1284 aa
AA seq
DB search
METKDQKKHRKKNSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
GVLTHLDSFKYNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHIP
GVGDFAVSDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
GFQESEEVRPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGVWMPKEEK
QMDLKTGRVRRKAIFGDEEDESGDSDDEDDEEMSESDKLENSSSDDEEEEEDAEMTDKQY
VPGKGIKRQKLEMEEDIEVDLPAFADSDDDLERSSVEEEAEEADESSEEEDSTAEEEEDI
LESKAVRKGSKPGLLETNDLSNRLNLEKSLTVKKATLTTSDSGHCTAEEAFASEDESEEN
SSLSREEDSENEEVIRKKFPKPSQVVSGQKLGSENLVDETSDIEDLLKEEEDYKEENNYS
TETSGALKWKEDLSRKAAEAFLRQQQATPNLRKLIYGTVTEDNEEEDGDTGEELGGLFHV
SQPARECKHKADSLDCSRFHVEAPHDWDLEEVMNSIRDCFVTGKWEEDKDAAKILAEDEE
LYGDFEDLETGDVHKGKSDPDAEVEDVEEEVKEEVDPSAEESAKKKHLDKKRKLKEMFDA
EYDEGESTYFDDLKGEMQKQAQINRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFV
LNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYY
IEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLD
KSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAP
EGAFRATFEDKLLMSDIVFMRTWYPVSVPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLV
HGIKLKPNKDSLYKPIIRQKKHFNSLHIPKALQKALPFKSKPKTQAKAGKTPKDRLRPAV
IREPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFKVKQKEEEEKLKRQKDLRKKL
FRIQGQKEKRNQKSSLKGSGEQSM
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggagactaaggaccagaagaaacacagaaagaaaaacagtgggcccaaagctgaaaag
aagaagaaacggcatctgcaggatcttcaacttggagatgaggaagatgcccggaaacga
aaccccaaagcttttgctgtccagtctgctgtgcggatggcaagatcctttcacaggact
caggatttgaaaacaaaaaaacatcacattccagtggttgatcgaactccactagagcca
ccaccaatagtggtagtggtgatggggcctccaaaagttggaaagagcactttgatccag
tgcctcattcggaactttaccaggcagaagctgacagagatcagaggccctgtaacaatt
gtgtcaggtaaaaaacgtagactcaccattattgaatgtgggtgtgacattaacatgatg
attgatcttgctaaagtagcagatttggttctgatgcttatagatgccagctttgggttt
gaaatggaaacatttgagtttctaaacatctgtcaagtacatggctttcctaaaattatg
ggcgttctcactcacctagattccttcaagtataataagcaactgaagaagacaaagaag
cgactgaaacacaggttctggacagaagtctacccgggtgccaagctgttttacctttct
ggaatggtacacggagaatatcaaaaccaagaaattcacaatctgggccgttttattaca
gttatgaagtttaggcctcttacatggcaaacttctcacccttatatcctggcagacagg
atggaagatttgacaaaccctgaagatattcgaacaaatatcaagtgtgaccgaaaggtg
tctctgtatggttatttaagaggagcacacttgaaaaataaaagccaaatccatatacca
ggtgtaggagattttgctgtaagtgatgtcagtttcctccccgacccctgtgcacttcct
gaacaacaaaagaagcgctgtttaaatgagaaggagaagttggtgtatgcacctctctct
ggagttggtggtgtgctgtatgacaaagacgctgtttatgtcgaccttgggggcagccat
ggcttccaggaatcggaggaggtgaggcccactcatgaactggtccagagtctcatttcc
acccattccactattgatgccaagatggcttccagtagagtgacacttttttctgattcc
aaaccactggggtcagaggatatagataatcaaggggtgtggatgccaaaagaggaaaag
caaatggatttgaaaactggtcgagtgcgtcggaaagccatttttggggatgaagaggat
gaatctggagatagtgatgatgaagatgatgaagaaatgtctgaaagtgacaaattggaa
aatagctctagtgatgatgaagaagaagaggaagatgctgaaatgactgataaacaatat
gtgcctggtaaaggtatcaaacggcaaaaacttgagatggaggaagatattgaggtagat
ttgccagcatttgccgatagtgatgatgaccttgagaggagctcagtggaagaagaagca
gaggaagctgatgaaagcagtgaagaagaggattccactgcagaagaagaggaggatatt
ttagaatctaaggctgttagaaaaggtagtaagccaggactcttagaaactaatgatttg
agcaataggctgaatttggagaagtctttgacagtgaaaaaggcaacccttactacatca
gattcgggtcattgcacagctgaagaggcatttgcatctgaagacgaatctgaagaaaac
tcctctctcagtagagaggaggattcagaaaatgaagaggttattaggaaaaagtttcca
aagccttctcaagtggtcagtggtcagaaattagggtcagagaacctagttgatgagacc
agtgatatagaagacttactcaaagaggaagaagattacaaggaagaaaataattattcc
acagaaacttcaggtgccctcaagtggaaggaagacctttccaggaaggcagctgaggcc
tttctgaggcagcaacaggcaactccaaaccttcgaaagctcatttatgggacagtgaca
gaggataatgaagaagaagatggtgataccggagaagagcttggagggttgtttcatgtc
agccagcctgccagagagtgtaagcacaaggctgactctttggactgctccagatttcat
gtggaggcaccccatgattgggatttagaggaggttatgaacagtatcagagattgcttt
gtgactgggaagtgggaagaggataaagatgcagccaagatcttagcagaagatgaggag
ctctatggtgactttgaagacctggaaacaggggacgtgcacaagggaaaatcagacccg
gatgctgaggttgaagatgtagaggaagaagttaaagaagaagttgaccccagcgcagag
gaaagtgccaaaaaaaagcatttagataaaaagagaaaattgaaggagatgtttgatgca
gagtatgatgaaggagaaagcacatactttgatgatcttaaaggagaaatgcagaaacaa
gcacagattaatcgggcggaatttgaagatcaagatgatgaagccagagttcagtatgag
ggttttcgacctgggatgtatgttcgaattgagatagaaaatgtaccctgtgaattcgtg
cttaactttgacccccattacccaattattttgggtggtttgggcaatagtgaaggcaat
gttggatatgtacagatgcgtctgaagaaacatcgttggtataaaaaaatcctcaagtcc
cgagatccaatcattttttctgttgggtggaggcggttccagactatcccgctttattat
attgaagaccacaatggaagacagaggcttctgaaatacaccccacagcacatgcattgt
ggagcaaccttttggggtcctatcactccacagggtactgggttcttggcaatacagtct
gtcagtggcataatgcctgatttccggatagctgccacaggagttgtccttgatctggat
aaatctataaaaattgtgaagaaattaaagctaactggctttccatataaaattttcaag
aacacttcattcattaagggaatgtttaattctgccttggaagtggccaaatttgaaggt
gctgtgattcgaactgtcagtggaataaggggacagatcaagaaggcactcagggctcca
gaaggagctttccgggccacctttgaggataaattgctgatgagtgatattgtcttcatg
agaacttggtatcctgtctccgttccagccttctataaccctgtaacatctttgttgaaa
ccagttggtgagaaagacacctggtcaggaatgcggacaactggtcaactccggcttgtc
catggcatcaaactaaaacccaacaaagattctctgtataagccaattataaggcaaaag
aaacattttaattcactgcatattccaaaagctttgcagaaggccctgccatttaagagc
aagcccaagacccaagcaaaggcaggcaagactccaaaggacagactgagaccagccgtc
atacgggagcctcatgaaaggaagatccttgcgctgctggatgctctgagtacagtgcat
agtcagaagatgaagaaggccaaggagcaacggcatctacacaacaaagaacacttcaaa
gtgaagcagaaggaggaagaagagaaactgaagcgacagaaggatctcaggaagaaactc
ttccgaattcagggtcagaaggaaaaaagaaatcagaagtccagtctgaaggggtctggg
gagcagtcgatgtga
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