Sus scrofa (pig): 100158211
Help
Entry
100158211 CDS
T01009
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X4
KO
K14416
elongation factor 1 alpha-like protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03015
mRNA surveillance pathway
ssc05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100158211 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100158211 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100158211 (HBS1L)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100158211 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
100158211
NCBI-ProteinID:
XP_013843513
Ensembl:
ENSSSCG00000004169
UniProt:
A0A8D0QSH2
A0A8D2C6Q7
LinkDB
All DBs
Position
1:28968778..29052427
Genome browser
AA seq
634 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVVEPVEEYDYE
DLKESSNSLLDHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEKDKIQNLKVKHEAAIPTGKIAKGVLLSSSEIPADNVQSFCPQPANHLDCSSKPYDFSG
PVAKHGYQNSSIVPNHYLLHKKKKLDRPKSEKKLESCKLTKELSLADLIGDMPRDSYNKS
QPSVRLSSTDRLESLLSKSLDADLLRPQASECIPPDDSAFKGIPDLKSLMIKNSTPNNSL
FIQNNSVPDLQNIPVQNSLGSLNNPLLLTSSLESMALDNLNASKMTEVGSVSSVEQSAKS
CMLKNDNLQFSQCENPYLAELFQEHKEKSPSQCFALSDLCNQSSASCTDLSLGSFPLSQL
ANRCQSSTGTSELTGSLSSLAFRKASPTRDLENLSLSDLIAETIDIDNSQIKKDSCMLSL
SEMRSPGIHSNIDLSVLIKAPDFVPKPVVDQSVAPMSGTKVLSSKLGKNSSSAKDNKKNC
KGSLTRKSPFSLSWTKALAARPSAFASTLCLRYPLKSCKRRTLDLYKTFLYSRQVQDVKD
KEISPLIAITPFDFKSASPDDIVKANQKKAFTRE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagttgttgaacctgtagaagaatatgattatgaa
gatttgaaagaatcctccaattctcttttggaccatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaaatttgatgtgcagaaggctttatcagtggtt
ctggagaaagataaaatccagaatttgaaagtcaagcatgaggcagcaatacctacagga
aagatagcaaaaggagtcttattatcttcctctgaaattccagctgataatgttcaaagc
ttttgtcctcaacctgcaaaccatttggattgcagtagcaaaccctatgatttttctggc
ccagtagcaaaacatggatatcaaaattcctcgattgtaccaaatcactatttgctccat
aaaaaaaagaaacttgacagacctaaaagtgaaaagaaactagaatcatgtaagttaaca
aaagagctgtcactagctgacctaattggtgatatgccaagagattcttataataaaagt
cagccatcagtcagattatcatccacagatagattggagagtctgctttcaaagagtcta
gatgctgatttgttaagacctcaggcttctgaatgtattcccccagatgattctgcattc
aaaggaataccagatttaaagtccttaatgataaagaattcaacacctaataactcttta
tttattcaaaataattcagtacctgatttgcaaaacattccagtacaaaacagcttagga
agtttaaataatcctttgctcttaactagctcattggaaagtatggctcttgataattta
aatgctagtaaaatgactgaagttggaagtgtttcttcagttgaacaaagtgccaagagt
tgcatgttaaaaaatgacaacttacagttttcccagtgtgaaaatccatacctagctgaa
ctgtttcaggagcacaaagaaaaaagtccaagccaatgctttgctttatccgatctttgt
aaccagtcatctgccagttgcacagatctaagtttgggatcctttcccttgtcacaacta
gcaaatcggtgtcagtcgtcaactggaacatcagaattaacaggatctctctcgtctttg
gcatttcgtaaagcttctccaacaagagaccttgagaatttatccctttctgatttgatt
gcagaaacgattgatatagacaactctcagattaagaaagattcctgtatgcttagttta
tctgaaatgaggtcacctggaatacattcgaatatcgatcttagtgtcctcataaaagcc
ccggattttgttccaaaacctgttgtagaccaatcagttgctccaatgtcagggactaaa
gttctaagttcaaagttagggaaaaattccagttctgctaaggataataagaaaaactgt
aaaggctctctgactaggaaatcacctttttctctgtcttggaccaaggcccttgctgcc
agaccttcagcttttgcttcaacactgtgtcttcgttatccattgaaaagctgcaagcga
cgcactcttgacctctataagacttttctttatagtagacaagttcaagatgtaaaggac
aaagaaataagtcctcttatagcaataacaccgtttgacttcaaatcagcatctcctgat
gacattgtaaaagctaatcaaaagaaagcttttactagagaatag
DBGET
integrated database retrieval system