KEGG   Sus scrofa (pig): 100158211
Entry
100158211         CDS       T01009                                 
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X4
  KO
K14416  elongation factor 1 alpha-like protein
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03015  mRNA surveillance pathway
ssc05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100158211 (HBS1L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    100158211 (HBS1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100158211 (HBS1L)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100158211 (HBS1L)
SSDB
Motif
Pfam: HBS1_N
Other DBs
NCBI-GeneID: 100158211
NCBI-ProteinID: XP_013843513
Ensembl: ENSSSCG00000004169
UniProt: A0A8D0QSH2 A0A8D2C6Q7
LinkDB
Position
1:28968778..29052427
AA seq 634 aa
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVVEPVEEYDYE
DLKESSNSLLDHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEKDKIQNLKVKHEAAIPTGKIAKGVLLSSSEIPADNVQSFCPQPANHLDCSSKPYDFSG
PVAKHGYQNSSIVPNHYLLHKKKKLDRPKSEKKLESCKLTKELSLADLIGDMPRDSYNKS
QPSVRLSSTDRLESLLSKSLDADLLRPQASECIPPDDSAFKGIPDLKSLMIKNSTPNNSL
FIQNNSVPDLQNIPVQNSLGSLNNPLLLTSSLESMALDNLNASKMTEVGSVSSVEQSAKS
CMLKNDNLQFSQCENPYLAELFQEHKEKSPSQCFALSDLCNQSSASCTDLSLGSFPLSQL
ANRCQSSTGTSELTGSLSSLAFRKASPTRDLENLSLSDLIAETIDIDNSQIKKDSCMLSL
SEMRSPGIHSNIDLSVLIKAPDFVPKPVVDQSVAPMSGTKVLSSKLGKNSSSAKDNKKNC
KGSLTRKSPFSLSWTKALAARPSAFASTLCLRYPLKSCKRRTLDLYKTFLYSRQVQDVKD
KEISPLIAITPFDFKSASPDDIVKANQKKAFTRE
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagttgttgaacctgtagaagaatatgattatgaa
gatttgaaagaatcctccaattctcttttggaccatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaaatttgatgtgcagaaggctttatcagtggtt
ctggagaaagataaaatccagaatttgaaagtcaagcatgaggcagcaatacctacagga
aagatagcaaaaggagtcttattatcttcctctgaaattccagctgataatgttcaaagc
ttttgtcctcaacctgcaaaccatttggattgcagtagcaaaccctatgatttttctggc
ccagtagcaaaacatggatatcaaaattcctcgattgtaccaaatcactatttgctccat
aaaaaaaagaaacttgacagacctaaaagtgaaaagaaactagaatcatgtaagttaaca
aaagagctgtcactagctgacctaattggtgatatgccaagagattcttataataaaagt
cagccatcagtcagattatcatccacagatagattggagagtctgctttcaaagagtcta
gatgctgatttgttaagacctcaggcttctgaatgtattcccccagatgattctgcattc
aaaggaataccagatttaaagtccttaatgataaagaattcaacacctaataactcttta
tttattcaaaataattcagtacctgatttgcaaaacattccagtacaaaacagcttagga
agtttaaataatcctttgctcttaactagctcattggaaagtatggctcttgataattta
aatgctagtaaaatgactgaagttggaagtgtttcttcagttgaacaaagtgccaagagt
tgcatgttaaaaaatgacaacttacagttttcccagtgtgaaaatccatacctagctgaa
ctgtttcaggagcacaaagaaaaaagtccaagccaatgctttgctttatccgatctttgt
aaccagtcatctgccagttgcacagatctaagtttgggatcctttcccttgtcacaacta
gcaaatcggtgtcagtcgtcaactggaacatcagaattaacaggatctctctcgtctttg
gcatttcgtaaagcttctccaacaagagaccttgagaatttatccctttctgatttgatt
gcagaaacgattgatatagacaactctcagattaagaaagattcctgtatgcttagttta
tctgaaatgaggtcacctggaatacattcgaatatcgatcttagtgtcctcataaaagcc
ccggattttgttccaaaacctgttgtagaccaatcagttgctccaatgtcagggactaaa
gttctaagttcaaagttagggaaaaattccagttctgctaaggataataagaaaaactgt
aaaggctctctgactaggaaatcacctttttctctgtcttggaccaaggcccttgctgcc
agaccttcagcttttgcttcaacactgtgtcttcgttatccattgaaaagctgcaagcga
cgcactcttgacctctataagacttttctttatagtagacaagttcaagatgtaaaggac
aaagaaataagtcctcttatagcaataacaccgtttgacttcaaatcagcatctcctgat
gacattgtaaaagctaatcaaaagaaagcttttactagagaatag

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