Sus scrofa (pig): 100170773
Help
Entry
100170773 CDS
T01009
Symbol
NLRP5
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 5
KO
K22626
NACHT, LRR and PYD domains-containing protein 5
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100170773 (NLRP5)
04054 Pattern recognition receptors [BR:
ssc04054
]
100170773 (NLRP5)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
100170773 (NLRP5)
Pattern recognition receptors [BR:
ssc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100170773 (NLRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
PYRIN
NOD2_WH
LRR_4
AAA_16
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100170773
NCBI-ProteinID:
XP_005664932
Ensembl:
ENSSSCG00000003316
ENSSSCG00000028861
Vega:
OTTSUSG00000001851
LinkDB
All DBs
Position
6:60375670..60418908
Genome browser
AA seq
1095 aa
AA seq
DB search
MGDTKLSSLSTYGLQWCFKQLGKEEFETFKEWLKETTSELATCSFPLAEVDDANSEHLTS
LLHEHYKDSFAWKISIDIFEKMHLSALSEVARDEMKKYFLAEIAEDSIPAKTDQGPSLEE
VPGHRDDQQNYRTHVMTRFSPELDTPVGGSEHFAFDRRETHLLSGAFSPDQGGFRPHTVV
LHGKPGVGKSALARRILLWWAQGKLYPGMFSYGFFLRAGEMQWVRESSLAELIAREWPES
QVSVEEILSQPERLLLVVDGCENLDLALEDDDSHLCGDWAEKQPTSLLLHRLLNKILLPE
CSLIITVRDGGIEKLQPLLLSPRYLLVEGLSVQKRMQVLLAHGKRDHPQGPAWLRSVVDN
HELWDKCQASAACSLIGKALKLQEAPGKSLPACQTLTALYATFLFHQLTPKDASRCCLSQ
EERATLKGLCRLAVEGMWETKFVFPSEDLAMHGLKEPELSALVHGSILVQDTRSQKCYAF
LHLSLQEFCAALYYILEGLETKHDPFPLFTGNMKSLMELKQIDFSVYLVQVKRFLFGLVS
EGMTGTLEALLGCPVPLVAKQGLLHWISLLGQHADTITPLDFLDAFHCLFETQDEELVHV
ALTGLQEVWLPVHRAMDFIVSSFCLQHGRDVQKIRLDVRGIPKDEGAEAWSRAPHGLQIK
TLDEHWEDLCSVLSTHPNLQHLDLSGSILSEQAMKTLCIKLRQPTCKIKNLIFKSAQVTP
GLRHLWVTLVINRKIKYLDLESTRLKEEDVVMACEAIKHPNCQLESLRLDRCGLTHSSCL
ALSQVLVTSVSLKSLSLAGNKVTDPSIKPLCDALRSTQCTLQKLILGDCGLTAADSQDLA
SALTKNQSLTHLYLASNSLGSEGVNLLGRAMKLPNCSLQRLILNACNLDVAGCGFLAFAL
MGNRRLTHLSLSVNPLEDDGMKLLCEVMMEPSCHLQDLELVKCQLTATCCKSLSHVITRN
KHLQSLDLAANALGDNGIEVLCEGLKQKNSLRRLGLEACELTSGCCEALSSALSGSEHLT
SLNLMQNNFSLGGMTKLCSAFAQPTCDLQMLGLWKWQYPAQMRRLLEELQRLKPQMVIGD
HWYSFAEDDRYWWKN
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaccaaactatcctcgttgtccacctatggactgcagtggtgtttcaagcag
ctaggcaaagaagagtttgagacatttaaggaatggctcaaggaaaccacgtcagaactt
gcaacgtgctctttcccgctggccgaagtggatgatgccaattcagagcatctcacctcc
ctcttgcacgagcattacaaagactcttttgcctggaagatctccatcgacatctttgaa
aagatgcacctgtctgcactctctgaggtggcaagggatgagatgaaaaaatattttctg
gctgaaatagcagaagattctataccagcaaagactgaccaaggtccaagcctggaagaa
gtgccaggccacagagatgaccaacagaactacaggacacatgtgatgacaagattctcc
ccggagctggacacacccgtgggcggttcagagcattttgcctttgaccgtcgagagaca
cacttgctgtcgggggcttttagcccagaccaggggggcttcaggcctcacacggtggtt
ctgcacggaaagccaggcgttgggaagtcggcgttggccagaaggatcctgctgtggtgg
gcgcaggggaaactctacccgggcatgttctcctatggcttttttctcagggccggagag
atgcagtgggtgagggagagcagcttggcagagctcatcgccagggagtggccagagtcc
caggtgtccgtggaggagatcttgtcccaaccagaaaggctcttgttggtggtggacggg
tgcgagaacctggacctggccctcgaagacgatgactcgcatctctgtggcgactgggca
gaaaagcagcccacgtccctcctgctgcaccgtctgctaaacaaaatcttgcttcctgag
tgctccctgatcatcacggtcagagacgggggcatagagaagctccagcccctgcttctg
tctccccgttacctgttggtggagggactctcggtgcagaaaaggatgcaggtgcttctc
gcgcatgggaagcgtgaccatccacaggggccagcctggttgcgctcggtagtggacaac
catgaactgtgggacaagtgccaggcgtccgccgcatgctcgctcatcggcaaggctctg
aagctgcaggaggctccagggaagagccttcccgcttgccagaccctcacggccttgtat
gccacgttcctgttccatcagctcaccccaaaagatgcatcccggtgctgtctgagtcag
gaagagagagccaccctgaagggcttgtgcaggctggcggtggagggcatgtgggagacc
aagtttgtgttccccagtgaggacctggccatgcacgggctgaaggagcccgagctctcg
gccctggttcatgggagcatcctggtccaggacacccgcagccagaagtgctatgccttc
ctgcacctgagcctccaggagttctgtgctgccttgtactacatcctggaaggcttggaa
accaagcacgaccccttccctctgttcactgggaacatgaagagtttgatggaactcaaa
caaatcgacttcagcgtctacctggtccaggtgaagaggttcttgtttggcctcgtgagt
gaaggcatgacggggacactggaagcccttcttggatgtcctgtccccctggtggcaaag
caggggcttctccactggatctctttgctgggccaacacgctgacaccatcaccccacta
gacttccttgacgccttccactgccttttcgagacccaagacgaggagctggttcacgtg
gcgctgaccggcctccaggaagtgtggcttccggtacaccgggcgatggacttcatagtg
tcttctttctgtctccagcatggccgggatgtacagaaaatccggttggatgtcagaggg
atcccaaaggatgaaggtgctgaggcgtggtccagggcgccccacgggctgcagatcaag
acccttgatgaacactgggaagatctctgctctgtgctcagcacccacccaaacctccaa
catctcgacctgagtggcagcatcttgagtgaacaggccatgaagaccctctgtattaag
ctgaggcaaccaacttgtaaaataaagaatctcatatttaaaagtgcccaggtgaccccc
ggtctccgtcacctctgggtaacgctcgttatcaatcgtaagattaaatacctggacctg
gaaagcactcgcctgaaggaggaagacgttgtgatggcttgtgaagccataaagcacccc
aactgccagctggagtctctgaggttggatcgctgcggattaacccacagctcttgtctg
gcgctttcccaagtccttgttacatccgtcagcctgaagtccctcagcctggcaggaaac
aaggtgacagacccgagcataaagccactctgcgatgccctgaggtctacacagtgcact
ctgcagaagctgatactcggggactgtggcctcacagctgctgacagccaggatctggcc
tcagccctcaccaagaaccagagcttgacacacctgtacctggccagcaacagcctgggg
agcgaaggcgtgaacctgttgggtcgagccatgaaacttcccaactgcagtctgcagagg
ctgatactgaatgcctgcaacctggatgtggctggctgtggcttccttgcatttgcactt
atgggcaaccgacgcctgacgcatctgagcctcagcgtgaaccccttggaggatgacggg
atgaagcttctgtgtgaggtcatgatggagccgtcgtgccatctccaggacctcgaactg
gtgaagtgccagctcactgccacttgctgcaagagcctgtcccacgtgatcacaagaaat
aaacacctgcagagcctggaccttgccgccaacgccctgggcgacaatgggatcgaagtg
ctgtgtgagggactgaagcagaagaattctctgaggagacttgggctggaggcgtgtgag
ctgacctcgggttgctgtgaggccctctcctccgccctctctggcagtgagcacctgacg
agcctgaacttgatgcagaataatttcagtcttggaggaatgacaaagctgtgctcagcc
ttcgcacagcccacctgtgatctacagatgcttgggctgtggaaatggcagtatcccgct
caaatgagaaggcttctggaggagctgcagcgactcaagccacagatggttattggtgac
cattggtattcttttgctgaagatgacagatactggtggaaaaactga
DBGET
integrated database retrieval system
