Sus scrofa (pig): 100170853
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Entry
100170853 CDS
T01009
Symbol
SMN1
Name
(RefSeq) survival motor neuron protein
KO
K13129
survival motor neuron protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100170853 (SMN1)
Spliceosome [BR:
ssc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100170853 (SMN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
SMN_G2-BD
TUDOR
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-GeneID:
100170853
NCBI-ProteinID:
NP_001124207
Ensembl:
ENSSSCG00000016970
UniProt:
B3VQJ1
LinkDB
All DBs
Position
16:complement(47738776..47777381)
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AA seq
293 aa
AA seq
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MAMGGGGGGSGVPEAEDSVLFRRGAGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIS
EASDKPKATPKRKPPKKNKSQKKNTTASLKQWKVGDRCSAIWSEDGCIYPATIASIDFKR
ETCIVVYTGYGDREEQNLSDLLSPTSEVANNIEENAQENENESQISTDESESSSRSPGNK
PNNIKSKAAPWNSFLPPPPPMPGAGLGPRKPGLKFNGPPPPPPPPPHFLSCWLPPFPSGP
PIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHFN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggcggcggtggcggcggcagcggtgttcctgaggcggaggactcggtgctg
ttccggcgcggtgcaggccagagtgatgattcggacatttgggatgatacagcgttgata
aaagcttatgataaagctgtggcttcatttaagcatgctctaaagaatggtgacatttcc
gaagcttcagataaaccaaaagccacacctaaaagaaaacctcctaagaagaataaaagc
caaaaaaagaataccacagcctccttgaagcagtggaaggttggtgacagatgttctgcc
atttggtcggaagatggctgcatttacccagctaccattgcttcgattgattttaagaga
gaaacctgtattgtggtttacactggatatggagatagagaagagcaaaatctgtctgat
ttactttcccccacctctgaagtagctaataatatagaagagaatgctcaggagaatgaa
aatgaaagtcaaatttccacagatgaaagtgagagctcctccagatctcctggaaataag
ccaaataacatcaagtcaaaagctgctccatggaactcttttctccctccaccaccccct
atgccaggagcaggtcttggaccaagaaagccaggtctaaaattcaacggcccaccacca
ccaccaccgccgccgccgcacttcctgtcatgctggctgcctccgtttccttctggacca
ccaataattccccccccacctcctatatgtccagattctctggatgatgctgatgctttg
ggaagtatgttaatctcttggtacatgagtggctatcatactggttactatatgggtttc
agacaaaatcaaaaagaaggaaggtgctcacatttcaattaa
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