Sus scrofa (pig): 100171390
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Entry
100171390 CDS
T01009
Symbol
FBXO40
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100171390 (FBXO40)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100171390 (FBXO40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-U11-48K
GHL5
Motif
Other DBs
NCBI-GeneID:
100171390
NCBI-ProteinID:
XP_020925935
UniProt:
F1SPD6
A0A4X1T7M7
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All DBs
Position
13:complement(138881528..138905410)
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AA seq
706 aa
AA seq
DB search
MGRARRPPPGEHRHCERCFNRHCHLPVEPSVSCLVISCHLSCGATFHMCKEAEHELLCPL
EQVPCLNSEYGCPLSMPRHKLAKHLQVCPASVVCCSMEWNRWPNVDSETTLHENIMKEPP
SEECLDTALALQDQKVLFKSLNMVELFPETREPTEEEPTLNGEASWEETGGAVGGADAGL
VTLSAANGEGAELSQEEREMLAKTKEGMDLAKFDKWENMFSKEHAASALTSSSVRCEGKS
KDGPEKEQISSGNDMVEEGAAKGKEPQEEQKQQDFSAAIEKTGLAPWQDGVLERLKTAVD
AKDYNMYLVHNGRMLIHFGQMPACTPKERDFVYGKLEAQEVKTVYTFKVPVSYCGKRARL
GDAMLSCRPSEHKAVDTSDLGITVEDLPKSDLIKTTLLCALERELKGHVISESRSIDGLF
MDFATQTYSFEPEQFSSGTVLADLTSANPNGLHVELHSECVTRRHNKSSSAFTFTCNKFF
RRDEFPLHFKNVHTDIQSCLNGWFQHRCPLAYLGCTFIQNHFRPPGQKAKVIYSQELNTF
AIKPEVASELSERWKNSHLSGHGGKSQNSLTSLPLEILQYIAGFLDSISLSQLSQVSVLM
RNICATLLQERGMVLLQWKKKRYSHGGTSWRVHRKIWQFSSLFSKIKSWEFNEVASMSEH
LKSCPFNIVEHKTDPILLTSMCQPHEQARETLVSTFRARTRGRHAY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggcacgcaggcctccgccaggggagcacagacactgtgagagatgcttcaac
cggcactgccaccttcccgtggagcccagcgtctcctgcctggtgataagctgccacctg
tcctgtggcgctaccttccacatgtgcaaagaggcagagcacgagctcctctgcccttta
gagcaggttccatgcctcaactctgaatacggctgccccctttccatgccccgccacaaa
ctggccaagcacctgcaagtgtgccctgccagtgtggtctgctgctccatggagtggaac
cgctggccgaacgtggactcagaaacaacccttcatgagaacatcatgaaagagcccccc
agtgaggagtgcctggacacagccctggccctccaggaccagaaggtccttttcaaatct
ctaaatatggtagaacttttcccagaaactagagaacccactgaggaggaaccaaccctg
aatggtgaagccagctgggaggaaacaggaggagctgttggtggagcggatgctggtctg
gtaacactgtcagctgcgaacggagagggggcagagctgagtcaagaagaaagagagatg
ttagccaaaaccaaagaagggatggacctggccaagtttgacaagtgggaaaatatgttc
agcaaagagcatgcggcttctgctttaacaagctcatcagtgcgctgtgagggcaagagc
aaggacggcccagagaaagaacagatttccagtggcaatgacatggtagaagagggagca
gccaaggggaaagaaccacaggaagagcagaagcagcaggacttttctgcagccatagaa
aagacagggcttgccccttggcaggatggggtcctggaaagactaaaaacagctgtggat
gcaaaggactataatatgtacctggtgcacaatgggaggatgcttattcactttggtcag
atgcctgcttgtacacctaaagagagagactttgtttacggcaaacttgaggctcaggaa
gtgaagactgtttacacctttaaagttcctgtgagctattgtgggaagcgggctcgcctc
ggagatgctatgttgagttgtaggccaagtgaacacaaggcagtagatacttcagattta
ggcatcactgtggaggatctgcccaaatcagatctcatcaagaccaccctcctgtgtgct
ttggaaagagaactcaaaggtcatgtcatctctgaatctaggagcattgatggcctgttc
atggattttgctacacagacatacagttttgagccagagcagttttcctctgggacagtg
ctggctgacctaaccagtgccaacccgaacgggctccatgtggagctccacagtgagtgt
gtcaccaggaggcacaacaagagcagttctgcctttactttcacttgcaacaaattcttc
aggagggatgagttccccctacatttcaagaatgtccacacagacattcagtcatgtctc
aatggctggttccagcaccgatgcccccttgcctacttgggatgcacctttattcaaaac
cacttccgtcctccagggcaaaaggcaaaagtgatctatagtcaagagctcaataccttt
gccatcaagccagaggttgcttcagagctgagtgagagatggaagaacagccatctctca
ggccatggaggaaaaagccagaattctctaaccagcctacccctggagattttgcagtac
attgctgggttcttggacagcattagcctgtcccagctctcccaggtgtccgtgctgatg
agaaatatctgtgccactttgttgcaagagagagggatggtcctcttgcagtggaagaag
aaaagatattcccatggaggcacctcctggagagttcacagaaagatctggcaattcagc
agcctcttctccaaaatcaagagctgggagtttaatgaagttgcctccatgtctgagcac
ctgaagtcctgtcctttcaacattgtagagcacaagactgacccgattcttttgaccagc
atgtgtcagccccatgagcaggcccgagagaccttagtctccaccttcagagccagaaca
cgaggaagacacgcctactaa
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